RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PTPN20Q4JDL3 420 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 CCDC70Q6NSX1 233 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 RFWD3Q6PCD5 774 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 CHST9Q7L1S5 443 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SLC26A9Q7LBE3 791 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 RABEPKQ7Z6M1 372 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 ZNF677Q86XU0 584 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 ZDHHC17Q8IUH5 632 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 TMEFF1Q8IYR6 380 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 C1orf131Q8NDD1 294 aaKnown RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 FIBINQ8TAL6 211 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 ANKRD7Q92527 254 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 MYEOVQ96EZ4 313 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 BTN2A3PQ96KV6 586 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 AGPAT1Q99943 283 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SLC6A17Q9H1V8 727 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 PRDM16Q9HAZ2 1276 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 SEPT11Q9NVA2 429 aaKnown RBP10.94□□□□□ -0.66
LITAF-216ENST00000574848 RNF14Q9UBS8 474 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
LITAF-216ENST00000574848 TYW5A2RUC4 315 aaKnown RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 KCNU1A8MYU2 1149 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PATE3B3GLJ2 98 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 CAPN9O14815 690 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 MAP3K13O43283 966 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 TBL1XO60907 577 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 DAB1O75553 588 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 ERBB2P04626 1255 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 ADRB1P08588 477 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 DLDP09622 509 aaKnown RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 TMEM253P0C7T8 217 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PNMA6AP0CW24 399 aaPredicted RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 MCM3P25205 808 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 CD70P32970 193 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SNX16P57768 344 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 ZNF33AQ06730 810 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 MTA1Q13330 715 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 TAF5Q15542 800 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PPM1JQ5JR12 505 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 EFHC1Q5JVL4 640 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 MBLAC2Q68D91 279 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 IL31Q6EBC2 164 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SERPINA13PQ6UXR4 307 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 FAM183BPQ6ZVS7 135 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PASD1Q8IV76 773 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SLC41A1Q8IVJ1 513 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 MFN1Q8IWA4 741 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 RHOT2Q8IXI1 618 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 KDM1BQ8NB78 822 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 ADAM32Q8TC27 787 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SORCS1Q8WY21 1168 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 PIGKQ92643 395 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 TTC17Q96AE7 1141 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 MYO19Q96H55 970 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 ZNF419Q96HQ0 510 aaPredicted RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 PRMT1Q99873 361 aaKnown RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 ITM2CQ9NQX7 267 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 TMEM74BQ9NUR3 256 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.93□□□□□ -0.66
LITAF-216ENST00000574848 XPO7Q9UIA9 1087 aaKnown RBP10.93□□□□□ -0.66
LITAF-216ENST00000574848 NENFQ9UMX5 172 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 SNX12Q9UMY4 172 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 CEP83Q9Y592 693 aa10.93□□□□□ -0.66
LITAF-216ENST00000574848 ANKRD62A6NC57 917 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 DDX3XO00571 662 aaKnown RBP eCLIP10.92□□□□□ -0.665e-10■■■■□ 22.1
LITAF-216ENST00000574848 CDX4O14627 284 aaPredicted RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 SYNCRIPO60506 623 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 LUC7L3O95232 432 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 ASLP04424 464 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 ATP1A1P05023 1023 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 ATP5BP06576 529 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 EPHX1P07099 455 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 SLC2A3P11169 496 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 GZMAP12544 262 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 CYP11B1P15538 503 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 TACR2P21452 398 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 ITPKAP23677 461 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 CD6P30203 668 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 PAFAH1B1P43034 410 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 NOP2P46087 812 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 GABRB2P47870 512 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 RPS24P62847 133 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 LMAN2Q12907 356 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 DCAF6Q58WW2 860 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 ZC3H12AQ5D1E8 599 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 TRIM61Q5EBN2 209 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 TEX35Q5T0J7 233 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 CCDC181Q5TID7 509 aa10.92□□□□□ -0.66
LITAF-216ENST00000574848 TTC39BQ5VTQ0 682 aaPredicted RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 OTUD1Q5VV17 481 aaPredicted RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 KIAA1324Q6UXG2 1013 aaKnown RBP10.92□□□□□ -0.66
LITAF-216ENST00000574848 ARMCX6Q7L4S7 300 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms