RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 EFCAB1Q9HAE3 211 aa9.79□□□□□ -0.84
CCDC40-212ENST00000574799 COQ4Q9Y3A0 265 aa9.79□□□□□ -0.84
CCDC40-212ENST00000574799 CFHP08603 1231 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ACAT1P24752 427 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GRK2P25098 689 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CCND2P30279 289 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SOX11P35716 441 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GARSP41250 739 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ACADVLP49748 655 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GPC3P51654 580 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CLCN2P51788 898 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 JAK3P52333 1124 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 KRT76Q01546 638 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MAPK11Q15759 364 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SWSAP1Q6NVH7 229 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 XRRA1Q6P2D8 792 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MAMDC4Q6UXC1 1216 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 EMC1Q8N766 993 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GABPB2Q8TAK5 448 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CAPSLQ8WWF8 208 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ISOC1Q96CN7 298 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 HNRNPABQ99729 332 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MTG1Q9BT17 334 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SNX25Q9H3E2 840 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 WDR55Q9H6Y2 383 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 VPS45Q9NRW7 570 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 NUB1Q9Y5A7 615 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 DNAJC25-GNG10A0A024R161 153 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 STX16-NPEPL1H3BU86 382 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 FARP2O94887 1054 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SFNP31947 248 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 BFSP2Q13515 415 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MTX3Q5HYI7 312 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GALNT18Q6P9A2 607 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SLC15A3Q8IY34 581 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GRIN3AQ8TCU5 1115 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 C20orf27Q9GZN8 174 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ING2Q9H160 280 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 JPH1Q9HDC5 661 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PIH1D1Q9NWS0 290 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SIRPGQ9P1W8 387 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 STYXL1Q9Y6J8 313 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MYL4P12829 197 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CPA3P15088 417 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 UBA1P22314 1058 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 NLRP11P59045 1033 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 NOMO3P69849 1222 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PRKCEQ02156 737 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 TGFBIQ15582 683 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CARTPTQ16568 116 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ANO4Q32M45 955 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PPM1LQ5SGD2 360 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 METTL21CQ5VZV1 264 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 NPNTQ6UXI9 565 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 MON1BQ7L1V2 547 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SIX5Q8N196 739 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 GPD1LQ8N335 351 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CCNYL1Q8N7R7 359 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 NSUN6Q8TEA1 469 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 DLG3Q92796 817 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PPP1R10Q96QC0 940 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 RTKNQ9BST9 563 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
CCDC40-212ENST00000574799 COG4Q9H9E3 785 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 PARVBQ9HBI1 364 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 CYP26B1Q9NR63 512 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 RBPJLQ9UBG7 517 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 TRIP11Q15643 1979 aa9.78□□□□□ -0.84
CCDC40-212ENST00000574799 AP1G1O43747 822 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 PIK3R1P27986 724 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 EPHA3P29320 983 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 ARL1P40616 181 aaPredicted RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 CDKN2BP42772 138 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 IREB2P48200 963 aaKnown RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 NDST2P52849 883 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 BCAR1P56945 870 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 GCNT1Q02742 428 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 PRPSAP1Q14558 356 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 DCDC5Q6ZRR9 648 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 EXOC8Q8IYI6 725 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 TDRD5Q8NAT2 981 aaKnown RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 CNDP1Q96KN2 507 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 DHX35Q9H5Z1 703 aaKnown RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 NOL11Q9H8H0 719 aaKnown RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 AS3MTQ9HBK9 375 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 PAK5Q9P286 719 aa9.77□□□□□ -0.84
CCDC40-212ENST00000574799 PRPF19Q9UMS4 504 aaKnown RBP9.77□□□□□ -0.84
CCDC40-212ENST00000574799 KANSL1LA0AUZ9 987 aa9.77□□□□□ -0.85
CCDC40-212ENST00000574799 KPNA7A9QM74 516 aa9.77□□□□□ -0.85
CCDC40-212ENST00000574799 CKMT2P17540 419 aa9.77□□□□□ -0.85
CCDC40-212ENST00000574799 RPL10P27635 214 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms