RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 HEPHQ9BQS7 1158 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 NIF3L1Q9GZT8 377 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 NXF1Q9UBU9 619 aaKnown RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 APOL1O14791 398 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 LTFP02788 710 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 ERVK-10P10266 1014 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 MCF2P10911 925 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 MAGEA6P43360 314 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 ABCG1P45844 678 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 SPIDRQ14159 915 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 PTK2BQ14289 1009 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 CYP2R1Q6VVX0 501 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 DPH6Q7L8W6 267 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 LYSMD3Q7Z3D4 306 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 DEPTORQ8TB45 409 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 TRPC4APQ8TEL6 797 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 CLEC4DQ8WXI8 215 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 CNDP1Q96KN2 507 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 ADPGKQ9BRR6 497 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 GLIS2Q9BZE0 524 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 NAA50Q9GZZ1 169 aaKnown RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 RPF2Q9H7B2 306 aaKnown RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 SNX15Q9NRS6 342 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 ASNSD1Q9NWL6 643 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 HES2Q9Y543 173 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 PCDHA10Q9Y5I2 948 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 FADS3Q9Y5Q0 445 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 H3BMQ9 156 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 K7ERI5 159 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 DGAT1O75907 488 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 SFNP31947 248 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 EIF2B2P49770 351 aaKnown RBP14.71□□□□□ -0.05
SMG6-215ENST00000574501 MAPK10P53779 464 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 IRF9Q00978 393 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 TRNP1Q6NT89 227 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 FAM196AQ6ZSG2 479 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 ZBTB33Q86T24 672 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.05
SMG6-215ENST00000574501 ARL10Q8N8L6 244 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 SLC4A11Q8NBS3 891 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 MCPH1Q8NEM0 835 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 PCDH19Q8TAB3 1148 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 CDKL2Q92772 493 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 PPWD1Q96BP3 646 aaKnown RBP14.71□□□□□ -0.05
SMG6-215ENST00000574501 COG8Q96MW5 612 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 EFCAB1Q9HAE3 211 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 CXorf21Q9HAI6 301 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 MTMR10Q9NXD2 777 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 STYXL1Q9Y6J8 313 aa14.71□□□□□ -0.05
SMG6-215ENST00000574501 BCLAF3A2AJT9 711 aaKnown RBP14.71□□□□□ -0.06
SMG6-215ENST00000574501 G3V2L1 256 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 PRPSAP2O60256 369 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 STBD1O95210 358 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 JUNP05412 331 aaKnown RBP14.71□□□□□ -0.06
SMG6-215ENST00000574501 CCDC130P13994 396 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 ZNF12P17014 697 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 CDH3P22223 829 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 CDH8P55286 799 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 KRT76Q01546 638 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 PMS2P3Q13401 168 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 PGM5Q15124 567 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 DCLRE1AQ6PJP8 1040 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 HERC6Q8IVU3 1022 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 TMEM130Q8N3G9 435 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 HM13Q8TCT9 377 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.06
SMG6-215ENST00000574501 SLCO4A1Q96BD0 722 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 DHX35Q9H5Z1 703 aaKnown RBP14.71□□□□□ -0.06
SMG6-215ENST00000574501 CAB39LQ9H9S4 337 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 DUS2Q9NX74 493 aaKnown RBP14.71□□□□□ -0.06
SMG6-215ENST00000574501 TXNDC16Q9P2K2 825 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 TSC22D4Q9Y3Q8 395 aa14.71□□□□□ -0.06
SMG6-215ENST00000574501 C9IYK1 514 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 SOCS2O14508 198 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 ALDH1A2O94788 518 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 MGAT1P26572 445 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 TGFB2P61812 414 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 RALGDSQ12967 914 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 DLG2Q15700 870 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 CA9Q16790 459 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 INSCQ1MX18 579 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 EML3Q32P44 896 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 AARS2Q5JTZ9 985 aaKnown RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 SEL1L3Q68CR1 1132 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 HMBOX1Q6NT76 420 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 RWDD4Q6NW29 188 aaKnown RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 TTC33Q6PID6 262 aaPredicted RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 KCNT2Q6UVM3 1135 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 ZBTB49Q6ZSB9 765 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 TMEM26Q6ZUK4 368 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 SP8Q8IXZ3 490 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 FAM110BQ8TC76 370 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 PIWIL1Q96J94 861 aaKnown RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 GATA5Q9BWX5 397 aaPredicted RBP14.7□□□□□ -0.06
SMG6-215ENST00000574501 ANKRD60Q9BZ19 345 aa14.7□□□□□ -0.06
SMG6-215ENST00000574501 ILKAPQ9H0C8 392 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms