RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
RPAIN-214ENST00000574003 METTL5Q9NRN9 209 aaKnown RBP11.67□□□□□ -0.54
RPAIN-214ENST00000574003 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FBXL12Q9NXK8 326 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 MPP6Q9NZW5 540 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 TMEM63CQ9P1W3 806 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 CEP295Q9C0D2 2601 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 NYNRINQ9P2P1 1898 aaKnown RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 A0A1B0GTW7 788 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 A0A1B0GVM2 712 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 A0A1B0GVT2 93 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 TCAF2A6NFQ2 919 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 KCNK3O14649 394 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 BCAT2O15382 392 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 SH3BP5O60239 455 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 SNAP91O60641 907 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 OPHN1O60890 802 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 MOCS3O95396 460 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 SLC2A3P11169 496 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 CD59P13987 128 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 GNSP15586 552 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF18P17022 549 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 SOX5P35711 763 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 CSNK1EP49674 416 aaKnown RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 CXCR3P49682 368 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 DEUP1Q05D60 604 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 E2F5Q15329 346 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 CST6Q15828 149 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 STX1AQ16623 288 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 POM121L1PQ3SYA9 428 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 KCNT1Q5JUK3 1230 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 RABGAP1LQ5R372 815 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ARTNQ5T4W7 220 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 PIP4P1Q86T03 277 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF683Q8IZ20 524 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 HDDC3Q8N4P3 179 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 AADATQ8N5Z0 425 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 AOPEPQ8N6M6 819 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF557Q8N988 423 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 C1orf216Q8TAB5 229 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 BIRC7Q96CA5 298 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 BTBD1Q9H0C5 482 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 WDCPQ9H6R7 721 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ARHGEF38Q9NXL2 777 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
RPAIN-214ENST00000574003 TMEM59LQ9UK28 342 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 TMEM131Q92545 1883 aa11.66□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 A0A0D9SEW6 157 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 EDDM13A0A1B0GTR0 161 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 K7ERQ8 282 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 BNIP3LO60238 219 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 GJB3O75712 270 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 MT-CO1P00395 513 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 CYP1A1P04798 512 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 IGHV4-34P06331 123 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 SYPP08247 313 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 CSRP1P21291 193 aaKnown RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 GLDCP23378 1020 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 SLC8A1P32418 973 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 PLK1P53350 603 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ATP11AP98196 1134 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 MYL5Q02045 173 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 UBXN1Q04323 297 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 TYRO3Q06418 890 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF177Q13360 481 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 C15orf59Q2T9L4 293 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 TTC31Q49AM3 519 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ACCSLQ4AC99 568 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 NCEH1Q6PIU2 408 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 TFAP2DQ7Z6R9 452 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 FAM131BQ86XD5 332 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 FRS2Q8WU20 508 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 NT5C3BQ969T7 300 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 PSMB7Q99436 277 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ORAI3Q9BRQ5 295 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 FEM1AQ9BSK4 669 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 EBF2Q9HAK2 575 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 DNAAF2Q9NVR5 837 aaKnown RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 SUSD2Q9UGT4 822 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 FNDC3AQ9Y2H6 1198 aaKnown RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-214ENST00000574003 OR51B4Q9Y5P0 310 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
RPAIN-214ENST00000574003 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms