RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 FMO1Q01740 532 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 AUHQ13825 339 aaKnown RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 NCAPHQ15003 741 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 PLEKHG6Q3KR16 790 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 RABGAP1LQ5R372 815 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 DCAF12L1Q5VU92 463 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 RNF219Q5W0B1 726 aaPredicted RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 TRNP1Q6NT89 227 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 PSAPL1Q6NUJ1 521 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 FBXL22Q6P050 247 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 C14orf80Q86SX3 495 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 ZDHHC17Q8IUH5 632 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 CCAR2Q8N163 923 aaKnown RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 ZCCHC9Q8N567 271 aaKnown RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 C18orf8Q96DM3 657 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 SPAG5Q96R06 1193 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 C11orf70Q9BRQ4 267 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 SIK2Q9H0K1 926 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 MIR1-1HGQ9H1L0 117 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 HSD3B7Q9H2F3 369 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 ANLNQ9NQW6 1124 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 ITM2CQ9NQX7 267 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 TMPRSS4Q9NRS4 437 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
RPA1-206ENST00000573994 WSB2Q9NYS7 404 aaPredicted RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 KIAA1522Q9P206 1035 aaPredicted RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
RPA1-206ENST00000573994 ERVW-1Q9UQF0 538 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 THADAQ6YHU6 1953 aa10.3□□□□□ -0.76
RPA1-206ENST00000573994 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 A0A1B0GVM2 712 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 TCAF2A6NFQ2 919 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 I6L893 689 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 TM4SF5O14894 197 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 MOCS3O95396 460 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GJB6O95452 261 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ASLP04424 464 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ADRB1P08588 477 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ZNF18P17022 549 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 CHRNB2P17787 502 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GABRB2P47870 512 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GCGRP47871 477 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 PSMD8P48556 350 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ECT2LQ008S8 904 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 CDR2Q01850 454 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 UBXN1Q04323 297 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 DEUP1Q05D60 604 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GFPT1Q06210 699 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 DUOXA1Q1HG43 343 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 HNRNPA1L2Q32P51 320 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 ANO6Q4KMQ2 910 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SYCP2LQ5T4T6 812 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SH3PXD2AQ5TCZ1 1133 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 TTC39BQ5VTQ0 682 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 DAB2IPQ5VWQ8 1189 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ZNF776Q68DI1 518 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 CXorf57Q6NSI4 855 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 CAVIN1Q6NZI2 390 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 SLC23A3Q6PIS1 610 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 APTXQ7Z2E3 356 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 RABEPKQ7Z6M1 372 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 EMC1Q8N766 993 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 OR52K2Q8NGK3 314 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SLC30A5Q8TAD4 765 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 CEP76Q8TAP6 659 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GANCQ8TET4 914 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 FOXJ1Q92949 421 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 ZNF419Q96HQ0 510 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 RPL10LQ96L21 214 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 CFAP57Q96MR6 1250 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 NPY6RQ99463 290 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 TKTL2Q9H0I9 626 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 C6orf106Q9H6K1 298 aaPredicted RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 FBRSQ9HAH7 460 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 CAPN10Q9HC96 672 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
RPA1-206ENST00000573994 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SERGEFQ9UGK8 458 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SLCO3A1Q9UIG8 710 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 STAP1Q9ULZ2 295 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SLC6A14Q9UN76 642 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 SLCO1B1Q9Y6L6 691 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 RALGAPA1Q6GYQ0 2036 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 GON4LQ3T8J9 2241 aa10.29□□□□□ -0.76
RPA1-206ENST00000573994 CKAP5Q14008 2032 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 MID1O15344 667 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 CNTN5O94779 1100 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 KCNK5O95279 499 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 DNTTP04053 509 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 SERPINF2P08697 491 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 VAV1P15498 845 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 CDK11BP21127 795 aaKnown RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 OXTRP30559 389 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 ACSL1P33121 698 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms