RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 SNRNP25Q9BV90 132 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 C2orf49Q9BVC5 232 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 SUN2Q9UH99 717 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 CCDC163A0A0D9SF12 145 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 H0Y858 1186 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 SGK1O00141 431 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 SYNCRIPO60506 623 aaKnown RBP13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 APBB3O95704 486 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 KRT7P08729 469 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 SP9P0CG40 484 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 SLC1A1P43005 524 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 IRAK1P51617 712 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 ECT2LQ008S8 904 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 MESDQ14696 234 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 KIAA1328Q86T90 577 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 GABRG3Q99928 467 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 CACNA2D2Q9NY47 1150 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 STON1Q9Y6Q2 735 aa13.11□□□□□ -0.31
TRAPPC1-206ENST00000573989 CKAP5Q14008 2032 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 TMEM110-MUSTN1A8MSY1 372 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 H3BRJ5 948 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 RAMP2O60895 175 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ADAM23O75077 832 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 EPHX1P07099 455 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HOXC13P31276 330 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 IL12RB1P42701 662 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 WASP42768 502 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HCAR3P49019 387 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 VAV2P52735 878 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 GNA12Q03113 381 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 TCF15Q12870 199 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ENPP2Q13822 863 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 KRT81Q14533 505 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 DPYSL2Q16555 572 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAP7D3Q8IWC1 876 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 APCDD1Q8J025 514 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 RTL3Q8N8U3 475 aaKnown RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 CYB5D2Q8WUJ1 264 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 SORCS1Q8WY21 1168 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HSPH1Q92598 858 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 PEBP4Q96S96 227 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ACOX2Q99424 681 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAGEH1Q9H213 219 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 EBF1Q9UH73 591 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 DNAI1Q9UI46 699 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 HPCAL4Q9UM19 191 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 ERVW-1Q9UQF0 538 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 FANCMQ8IYD8 2048 aa13.1□□□□□ -0.31
TRAPPC1-206ENST00000573989 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 K7ESF4 209 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 RARAP10276 462 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 IL1R2P27930 398 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 CNR2P34972 360 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 YBEYP58557 167 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 SLC25A11Q02978 314 aaKnown RBP13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 KIF5AQ12840 1032 aa13.09□□□□□ -0.31
TRAPPC1-206ENST00000573989 BYSLQ13895 437 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms