RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PACSIN1Q9BY11 444 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 TRIM7Q9C029 511 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 TMPRSS4Q9NRS4 437 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 THAP10Q9P2Z0 257 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 MMP17Q9ULZ9 603 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 SNX10Q9Y5X0 201 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 EPN1Q9Y6I3 576 aaPredicted RBP11.35□□□□□ -0.59
CHD3-216ENST00000573936 CHD8Q9HCK8 2581 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 LAMA1P25391 3075 aa11.35□□□□□ -0.59
CHD3-216ENST00000573936 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
CHD3-216ENST00000573936 LRCH4O75427 683 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ALDH1A2O94788 518 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 NDUFA10O95299 355 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 RHOCP08134 193 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
CHD3-216ENST00000573936 RHOQP17081 205 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 OR1E1P30953 314 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 CD70P32970 193 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 GGCXP38435 758 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 DGKEP52429 567 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 PLK1P53350 603 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ST8SIA6P61647 398 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 SATB1Q01826 763 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 SULT2A1Q06520 285 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 TCEAL1Q15170 157 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ST3GAL2Q16842 350 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 FSCBQ5H9T9 825 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 MANEALQ5VSG8 457 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 EGFLAMQ63HQ2 1017 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 RWDD4Q6NW29 188 aaKnown RBP11.34□□□□□ -0.59
CHD3-216ENST00000573936 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ZNF783Q6ZMS7 281 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ADIPOR2Q86V24 386 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 CIR1Q86X95 450 aaPredicted RBP11.34□□□□□ -0.59
CHD3-216ENST00000573936 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 CCDC33Q8N5R6 958 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ALLCQ8N6M5 410 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ARFGAP1Q8N6T3 406 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ZBTB44Q8NCP5 570 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 SLC35G2Q8TBE7 412 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 WFDC5Q8TCV5 224 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 RFFLQ8WZ73 363 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 TTC17Q96AE7 1141 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 EPC1Q9H2F5 836 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 CATSPERBQ9H7T0 1116 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 PCSK1NQ9UHG2 260 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 ACACBO00763 2458 aa11.34□□□□□ -0.59
CHD3-216ENST00000573936 KIAA1549LQ6ZVL6 1849 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 ILVBLA1L0T0 632 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 NRDCO43847 1150 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 CREB3O43889 395 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 MTA2O94776 668 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 CNTN5O94779 1100 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 LRIG2O94898 1065 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 PROSCO94903 275 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 SRPRAP08240 638 aaKnown RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 HOXB2P14652 356 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 MAN1A1P33908 653 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 ETFBP38117 255 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 NNMTP40261 264 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 CSKP41240 450 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 MAPKAPK2P49137 400 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 KRT83P78385 493 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 ECT2LQ008S8 904 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 ZNF234Q14588 700 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 CRY1Q16526 586 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 PLEKHG6Q3KR16 790 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 FUT11Q495W5 492 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 ALFQ53S48 1182 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 PITRM1Q5JRX3 1037 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 RNF219Q5W0B1 726 aaPredicted RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 TMEM215Q68D42 235 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 CXorf57Q6NSI4 855 aaKnown RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 KDM1BQ8NB78 822 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 TEKT4Q8WW24 435 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 GABRG3Q99928 467 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 SNRNP25Q9BV90 132 aaKnown RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.6
CHD3-216ENST00000573936 TMEM248Q9NWD8 314 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 SUN2Q9UH99 717 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 STON1Q9Y6Q2 735 aa11.33□□□□□ -0.6
CHD3-216ENST00000573936 MYOFQ9NZM1 2061 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 A0A0A6YYK5 440 aaPredicted RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 CCDC163A0A0D9SF12 145 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 WASH4PA8MWX3 477 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FAM72CH0Y354 149 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 K7ESF4 209 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 SGK1O00141 431 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 DAPK3O43293 454 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms