RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TXNDC9O14530 226 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ETS2P15036 469 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 GLDCP23378 1020 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 SERPINB5P36952 375 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 LIMK2P53671 638 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 PDK1Q15118 436 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ZBTB6Q15916 424 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 GRAMD1BQ3KR37 738 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 SLC25A52Q3SY17 297 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ZNF618Q5T7W0 954 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 TDRD5Q8NAT2 981 aaKnown RBP19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ACVR1CQ8NER5 493 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 SLC2A14Q8TDB8 520 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 KBTBD7Q8WVZ9 684 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 FAM149B1Q96BN6 582 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 FOLH1Q04609 750 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 DCAF6Q58WW2 860 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 CLEC14AQ86T13 490 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 WDR55Q9H6Y2 383 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 PPP2R3BQ9Y5P8 575 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 CAPN8A6NHC0 703 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 PEX1O43933 1283 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 PABPC4LP0CB38 370 aaKnown RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 NUMBP49757 651 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 ANKRD20A4Q4UJ75 823 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 OGFRL1Q5TC84 451 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 UGT2A3Q6UWM9 527 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 GCNAQ96QF7 691 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 GATA5Q9BWX5 397 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 LRRC40Q9H9A6 602 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 TCF7L2Q9NQB0 619 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 ZCWPW2A0A1B0GU75 182 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 AIM2O14862 343 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 CHRNGP07510 517 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 GNL1P36915 607 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 ALDH1A3P47895 512 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 HSP90AA5PQ58FG0 334 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 PPM1LQ5SGD2 360 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 MAP3K21Q5TCX8 1036 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 C9orf57Q5W0N0 161 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 CRYBG2Q8N1P7 616 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 LRRC52Q8N7C0 313 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 SNX27Q96L92 541 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 PPP1R36Q96LQ0 422 aa19.48■□□□□ 0.71
SCARF1-206ENST00000573852 EIF2AQ9BY44 585 aaKnown RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 MAGED2Q9UNF1 606 aaPredicted RBP19.48■□□□□ 0.71
SCARF1-206ENST00000573852 TMEM114B3SHH9 223 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 TRIM13O60858 407 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 C2P06681 752 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 ACAT1P24752 427 aaKnown RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 METTL21CQ5VZV1 264 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 TMEM135Q86UB9 458 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 ICA1LQ8NDH6 482 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 URGCPQ8TCY9 931 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 OTUD5Q96G74 571 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 FERMT1Q9BQL6 677 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 PLEKHA5Q9HAU0 1116 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 KLHL8Q9P2G9 620 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 PCNTO95613 3336 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 MPSTP25325 297 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 PIK3R1P27986 724 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 TKTP29401 623 aaKnown RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 HOXA11P31270 313 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 ACADSBP45954 432 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 CCR10P46092 362 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 NUDT2P50583 147 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 CHN2P52757 468 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 ITGA7Q13683 1181 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 PAFAH1B3Q15102 231 aaKnown RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 SDCCAG8Q86SQ7 713 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 SATL1Q86VE3 508 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 MFSD3Q96ES6 412 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 NMRAL1Q9HBL8 299 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
SCARF1-206ENST00000573852 VANGL2Q9ULK5 521 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 DERAQ9Y315 318 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 DTNAQ9Y4J8 743 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 SLC4A7Q9Y6M7 1214 aa19.47■□□□□ 0.71
SCARF1-206ENST00000573852 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
SCARF1-206ENST00000573852 NEMP1O14524 444 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 SPTLC1O15269 473 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 FBXO21O94952 628 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 ADIGQ0VDE8 80 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 DYNC1I2Q13409 638 aaKnown RBP19.46■□□□□ 0.71
SCARF1-206ENST00000573852 TLR1Q15399 786 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
SCARF1-206ENST00000573852 SNX32Q86XE0 403 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PSTKQ8IV42 348 aaKnown RBP19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PQLC1Q8N2U9 271 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 BEST2Q8NFU1 509 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 HSFY1Q96LI6 401 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 BTBD9Q96Q07 612 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 HAPLN3Q96S86 360 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 GPRC5DQ9NZD1 345 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 STK39Q9UEW8 545 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 G3BP2Q9UN86 482 aaKnown RBP19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PSMD13Q9UNM6 376 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 GINS2Q9Y248 185 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms