RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 CD1EP15812 388 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GRIA2P42262 883 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 ALDH1A3P47895 512 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 CHN2P52757 468 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 IRF9Q00978 393 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
NUP88-207ENST00000573584 SLC2A14Q8TDB8 520 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GCNAQ96QF7 691 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 NMRAL1Q9HBL8 299 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 KLHL8Q9P2G9 620 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 SLC4A7Q9Y6M7 1214 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PTPRFP10586 1907 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 TMEM114B3SHH9 223 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 THRAP10827 490 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 ETS2P15036 469 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 RPL34P49207 117 aaKnown RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 NUDT2P50583 147 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 HSP90AA5PQ58FG0 334 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 LRRC52Q8N7C0 313 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 DNAAF3Q8N9W5 541 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 ILKAPQ9H0C8 392 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 PLEKHA5Q9HAU0 1116 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PRDM16Q9HAZ2 1276 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 BFARQ9NZS9 450 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 VANGL2Q9ULK5 521 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 DTNAQ9Y4J8 743 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 COMMD3-BMI1R4GMX3 469 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 A0A1B0GVG6 124 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 IRF6O14896 467 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 MPOP05164 745 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GLDCP23378 1020 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PITX1P78337 314 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 ARHGAP1Q07960 439 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 OGFRL1Q5TC84 451 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 PSTKQ8IV42 348 aaKnown RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 BEST2Q8NFU1 509 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PIP4K2CQ8TBX8 421 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 URGCPQ8TCY9 931 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 HSFY1Q96LI6 401 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 PPP1R36Q96LQ0 422 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 WDR55Q9H6Y2 383 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 STK39Q9UEW8 545 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 MAGED2Q9UNF1 606 aaPredicted RBP15.98■□□□□ 0.15
NUP88-207ENST00000573584 PSMD13Q9UNM6 376 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 GINS2Q9Y248 185 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 DERAQ9Y315 318 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 CSADQ9Y600 493 aa15.98■□□□□ 0.15
NUP88-207ENST00000573584 LTFP02788 710 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 C2P06681 752 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 ZNF286BP0CG31 522 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 RPL26P61254 145 aaKnown RBP15.97■□□□□ 0.15
NUP88-207ENST00000573584 UGT2A3Q6UWM9 527 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 TMEM135Q86UB9 458 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 CRYBG2Q8N1P7 616 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 PQLC1Q8N2U9 271 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 MOCOSQ96EN8 888 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 HAPLN3Q96S86 360 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 GATA5Q9BWX5 397 aaPredicted RBP15.97■□□□□ 0.15
NUP88-207ENST00000573584 HES2Q9Y543 173 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 ZCWPW2A0A1B0GU75 182 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 KLHL33A6NCF5 533 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 NEMP1O14524 444 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 PIK3R1P27986 724 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 ZBTB6Q15916 424 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 CLEC14AQ86T13 490 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 SATL1Q86VE3 508 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 SNX32Q86XE0 403 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 KYQ8NBH2 561 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 KBTBD7Q8WVZ9 684 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 MFSD3Q96ES6 412 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 SERPINI1Q99574 410 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 C6orf203Q9P0P8 240 aaPredicted RBP15.97■□□□□ 0.15
NUP88-207ENST00000573584 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
NUP88-207ENST00000573584 G3BP2Q9UN86 482 aaKnown RBP15.97■□□□□ 0.15
NUP88-207ENST00000573584 RGSL1A5PLK6 1076 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 CHRNGP07510 517 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 NUMBP49757 651 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 LAMC2Q13753 1193 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 DCAF4L1Q3SXM0 396 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 C9orf57Q5W0N0 161 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 TMC7Q7Z402 723 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 NAT14Q8WUY8 206 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 SNX27Q96L92 541 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 ACSS2Q9NR19 701 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 C15orf38-AP3S2A0A0A6YYH1 394 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 MATN2O00339 956 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 EEF2KO00418 725 aaKnown RBP15.96■□□□□ 0.15
NUP88-207ENST00000573584 RPS6KA3P51812 740 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 ADIGQ0VDE8 80 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 NME3Q13232 169 aa15.96■□□□□ 0.15
NUP88-207ENST00000573584 PAFAH1B3Q15102 231 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms