RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FSBPO95073 299 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 F9P00740 461 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 FLT3P36888 993 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 SCNN1AP37088 669 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 PSMD8P48556 350 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CXCR3P49682 368 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 OXCT1P55809 520 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 JAM2P57087 298 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CDR2Q01850 454 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CST6Q15828 149 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 SLC25A52Q3SY17 297 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 ACCSLQ4AC99 568 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CXorf57Q6NSI4 855 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 KDM1BQ8NB78 822 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 DNASE2BQ8WZ79 361 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CFAP57Q96MR6 1250 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CNTNAP3BQ96NU0 1288 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 OMDQ99983 421 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 MUC3BQ9H195 1237 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 SLC32A1Q9H598 525 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 METTL5Q9NRN9 209 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 FBXL12Q9NXK8 326 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 SLC25A13Q9UJS0 675 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 NOCTQ9UK39 431 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 VPS28Q9UK41 221 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 CKAP5Q14008 2032 aa13.08□□□□□ -0.32
NPLOC4-213ENST00000573519 A0A1W2PP55 124 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 MID1O15344 667 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CLDN11O75508 207 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CNTN5O94779 1100 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CEACAM1P13688 526 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 VAV1P15498 845 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CHRNB2P17787 502 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CSRP1P21291 193 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 ZNF165P49910 485 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 ATP11AP98196 1134 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 FMO1Q01740 532 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 SULT2A1Q06520 285 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 GRIK2Q13002 908 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 CDO1Q16878 200 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 STK40Q8N2I9 435 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 EMC1Q8N766 993 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 NT5C3BQ969T7 300 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 BPIFA3Q9BQP9 254 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 SGK2Q9HBY8 427 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 SCML1Q9UN30 329 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 DAAM1Q9Y4D1 1078 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 ITIH6Q6UXX5 1313 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 LAMA1P25391 3075 aa13.07□□□□□ -0.32
NPLOC4-213ENST00000573519 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 TEX33O43247 280 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 BNIP3LO60238 219 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 IL1BP01584 269 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 RHOCP08134 193 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 SLC8A1P32418 973 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 PLK1P53350 603 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 CDH4P55283 916 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 FOXC1Q12948 553 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 IQCB1Q15051 598 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 ALFQ53S48 1182 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 TRNP1Q6NT89 227 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 USP30Q70CQ3 517 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 OR52K2Q8NGK3 314 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 PTPRN2Q92932 1015 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 FEM1AQ9BSK4 669 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 SERGEFQ9UGK8 458 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 TMEM59LQ9UK28 342 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 ANGPTL2Q9UKU9 493 aa13.06□□□□□ -0.32
NPLOC4-213ENST00000573519 E9PAM4 449 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 I6L893 689 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 GJB6O95452 261 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 ADH1BP00325 375 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms