RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ODF2Q5BJF6 829 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 LYSMD4Q5XG99 296 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
NDE1-206ENST00000572967 ANKS1BQ7Z6G8 1248 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 DDIT4Q9NX09 232 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 TRMT1Q9NXH9 659 aaKnown RBP12.24□□□□□ -0.45
NDE1-206ENST00000572967 SLC12A6Q9UHW9 1150 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 CLEC4EQ9ULY5 219 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 CYP8B1Q9UNU6 501 aa12.24□□□□□ -0.45
NDE1-206ENST00000572967 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
NDE1-206ENST00000572967 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
NDE1-206ENST00000572967 FAM170AA1A519 330 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 RCCD1A6NED2 376 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 MIF4GDA9UHW6 222 aaKnown RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 WASH3PC4AMC7 463 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 TSPAN3O60637 253 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 GABBR2O75899 941 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 APOEP02649 317 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 ADRB1P08588 477 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 KRT7P08729 469 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 HOXD9P28356 352 aaPredicted RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 PCK1P35558 622 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 FLT3P36888 993 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 IL12RB1P42701 662 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 SGSHP51688 502 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 RPL7AP62424 266 aaKnown RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 RPL6Q02878 288 aaKnown RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 MESDQ14696 234 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 TRIP4Q15650 581 aaPredicted RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 NUGGCQ68CJ6 796 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 SDE2Q6IQ49 451 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 PHLDB2Q86SQ0 1253 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 DNAAF5Q86Y56 855 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 CPXM2Q8N436 756 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 JOSD2Q8TAC2 188 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 RNF34Q969K3 372 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 PGAP3Q96FM1 320 aaPredicted RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 PIWIL1Q96J94 861 aaKnown RBP12.23□□□□□ -0.45
NDE1-206ENST00000572967 TBCBQ99426 244 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 GABRG3Q99928 467 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 CIPCQ9C0C6 399 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 CD248Q9HCU0 757 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 OSGEPQ9NPF4 335 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 FSCN3Q9NQT6 498 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
NDE1-206ENST00000572967 IGHV1OR15-9A0A0B4J2B8 117 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 M0QYT0 321 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 KHNYNO15037 678 aaKnown RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 BUB1O43683 1085 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 PRPSAP2O60256 369 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 BUB1BO60566 1050 aaPredicted RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 TRUB2O95900 331 aaKnown RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 CFIP05156 583 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 ITPKAP23677 461 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 CCR1P32246 355 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 CETN2P41208 172 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 SSR1P43307 286 aaKnown RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 HARS2P49590 506 aaKnown RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 ZNF135P52742 658 aaPredicted RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 RING1Q06587 406 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 TAF5Q15542 800 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 TRIM61Q5EBN2 209 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 PEX26Q7Z412 305 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 PSTKQ8IV42 348 aaKnown RBP12.22□□□□□ -0.45
NDE1-206ENST00000572967 UNC45BQ8IWX7 931 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 FAM217AQ8IXS0 508 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 EMC1Q8N766 993 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 UBL4BQ8N7F7 174 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 FAM172AQ8WUF8 416 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 NT5C3BQ969T7 300 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 NPY6RQ99463 290 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 NAALADL1Q9UQQ1 740 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 STON1Q9Y6Q2 735 aa12.22□□□□□ -0.45
NDE1-206ENST00000572967 C4orf47A7E2U8 309 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
NDE1-206ENST00000572967 IRAK2O43187 625 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 PSTPIP1O43586 416 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 PALMO75781 387 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 MOCS3O95396 460 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 PRKCHP24723 683 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 MAPK8P45983 427 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 TBX4P57082 545 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 ATP11AP98196 1134 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 NME3Q13232 169 aa12.21□□□□□ -0.45
NDE1-206ENST00000572967 BYSLQ13895 437 aaKnown RBP12.21□□□□□ -0.45
NDE1-206ENST00000572967 ZNF234Q14588 700 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms