RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 USP13Q92995 863 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 NAT9Q9BTE0 207 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 GATA5Q9BWX5 397 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 TUBGCP4Q9UGJ1 667 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 PSMD13Q9UNM6 376 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SSC5DA1L4H1 1573 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 PIM1P11309 404 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 PIK3R1P27986 724 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SPRP35270 261 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SERPINB8P50452 374 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 THOP1P52888 689 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 NAB1Q13506 487 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 CNGA3Q16281 694 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 FAM187BQ17R55 369 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 ZDHHC17Q8IUH5 632 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 EGFL6Q8IUX8 553 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 DEFB106AQ8N104 65 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 DNAAF3Q8N9W5 541 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 C18orf25Q96B23 403 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 MFSD3Q96ES6 412 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 BTBD9Q96Q07 612 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 NFKBIZQ9BYH8 718 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 CITO14578 2027 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 MYOCOSA0A1B0GUC4 107 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 CCDC78A2IDD5 438 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 ATP9BO43861 1147 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 TRIM13O60858 407 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 FBXO21O94952 628 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 XRCC1P18887 633 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-205ENST00000571272 LMO2P25791 158 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 SULT1E1P49888 294 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 SNX16P57768 344 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 GK3PQ14409 553 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 DSELQ8IZU8 1212 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 TRPM4Q8TD43 1214 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 APOL2Q9BQE5 337 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 EIF2B3Q9NR50 452 aaKnown RBP17.84■□□□□ 0.45
SCARF1-205ENST00000571272 ERAP1Q9NZ08 941 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 KLHL8Q9P2G9 620 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-205ENST00000571272 STK39Q9UEW8 545 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 CCDC160A6NGH7 325 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 PEX1O43933 1283 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 DNAJA2O60884 412 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 C2P06681 752 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 SMIM18P0DKX4 95 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 ITGA7Q13683 1181 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 FLOT2Q14254 428 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 PPP2R5DQ14738 602 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 TMEM198Q66K66 360 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 RNF139Q8WU17 664 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 MARK4Q96L34 752 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 CNBD2Q96M20 576 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 LRGUKQ96M69 825 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 NUF2Q9BZD4 464 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 COPS7BQ9H9Q2 264 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-205ENST00000571272 NMRAL1Q9HBL8 299 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 APPL1Q9UKG1 709 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 FZD10Q9ULW2 581 aa17.84■□□□□ 0.45
SCARF1-205ENST00000571272 TSPAN1O60635 241 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 ATP6V1B1P15313 513 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 GLDCP23378 1020 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 PRDX6P30041 224 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 LIMK2P53671 638 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 PDCD2Q16342 344 aaPredicted RBP17.83■□□□□ 0.45
SCARF1-205ENST00000571272 LSM12Q3MHD2 195 aaKnown RBP17.83■□□□□ 0.45
SCARF1-205ENST00000571272 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 SPANXN3Q5MJ09 141 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 ARMC3Q5W041 872 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.83■□□□□ 0.45
SCARF1-205ENST00000571272 URGCPQ8TCY9 931 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 MPP4Q96JB8 637 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 SNTG2Q9NY99 539 aa17.83■□□□□ 0.45
SCARF1-205ENST00000571272 ZNF638Q14966 1978 aaKnown RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 TK2O00142 265 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 STAU1O95793 577 aaKnown RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 THRAP10827 490 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 ENO3P13929 434 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 SLC26A2P50443 739 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 BST2Q10589 180 aaKnown RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 VGLL4Q14135 290 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 RBM44Q6ZP01 1051 aaKnown RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 KYQ8NBH2 561 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 AFG1LQ8WV93 481 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 RCN3Q96D15 328 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 ILKAPQ9H0C8 392 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-205ENST00000571272 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.44
SCARF1-205ENST00000571272 STX16-NPEPL1H3BU86 382 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 ACAT1P24752 427 aaKnown RBP17.82■□□□□ 0.44
SCARF1-205ENST00000571272 GLRBP48167 497 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 NME3Q13232 169 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 NXNQ6DKJ4 435 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 IYDQ6PHW0 289 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 GALNT4Q8N4A0 578 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 DNAJC1Q96KC8 554 aaKnown RBP17.82■□□□□ 0.44
SCARF1-205ENST00000571272 FERMT1Q9BQL6 677 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms