RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TMEM60Q9H2L4 133 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 ASB7Q9H672 318 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 FBRSQ9HAH7 460 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 C17orf75Q9HAS0 396 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 CDH9Q9ULB4 789 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 AGAP1Q9UPQ3 857 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 C2CD2Q9Y426 696 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 LOXL2Q9Y4K0 774 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 SNX9Q9Y5X1 595 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 SCN8AQ9UQD0 1980 aa7.22□□□□□ -1.25
CHD3-213ENST00000571249 MXRA5Q9NR99 2828 aa7.21□□□□□ -1.25
CHD3-213ENST00000571249 A0A0B4J269 797 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 NTN3O00634 580 aaPredicted RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 WNT7AO00755 349 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 MID1O15344 667 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 MAGEC1O60732 1142 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 RNASEH2AO75792 299 aaKnown RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 PDGFRBP09619 1106 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 CCNYL3P0C7X3 344 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 POLR2BP30876 1174 aaKnown RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 CCT6AP40227 531 aaKnown RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 ACOT2P49753 483 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 TUBP50607 506 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 ARSDP51689 593 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 SMTNP53814 917 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 NUCB2P80303 420 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 KCNMA1Q12791 1236 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 MAPRE1Q15691 268 aaKnown RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 SOWAHAQ2M3V2 549 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 SNX30Q5VWJ9 437 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 ALKBH2Q6NS38 261 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 Q71RC1 249 aaPredicted RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 HS2ST1Q7LGA3 356 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 NUP93Q8N1F7 819 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 SCAMP5Q8TAC9 235 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 OVCA2Q8WZ82 227 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 C19orf60Q96EN9 201 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 TMX3Q96JJ7 454 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 CCDC3Q9BQI4 270 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 RUSC1Q9BVN2 902 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 SEMA6CQ9H3T2 930 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 RUBCNLQ9H714 662 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 TMEM30AQ9NV96 361 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 KLHL11Q9NVR0 708 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 LUZP4Q9P127 313 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 ORC3Q9UBD5 711 aaPredicted RBP7.21□□□□□ -1.26
CHD3-213ENST00000571249 PLA2G4CQ9UP65 541 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 VPS13CQ709C8 3753 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 ABCA4P78363 2273 aa7.21□□□□□ -1.26
CHD3-213ENST00000571249 NEMP2A6NFY4 417 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 ZNF891A8MT65 544 aaPredicted RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 E9PMD0 336 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 CPLX1O14810 134 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 HNRNPDLO14979 420 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 TLR5O60602 858 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 RTN3O95197 1032 aaPredicted RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 CBX6O95503 412 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 OR52Z1P0C646 297 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 PLS3P13797 630 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 PLCG1P19174 1290 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 LEPRP48357 1165 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 LTBQ06643 244 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 GOLGA8FQ08AF8 430 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 GOLGA8DPQ0D2H9 430 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 OVGP1Q12889 678 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 NR5A1Q13285 461 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 EIF3IQ13347 325 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 SEPT6Q14141 434 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 KRT32Q14532 448 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 STAT4Q14765 748 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 SKOR2Q2VWA4 1001 aaPredicted RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 DEFB133Q30KQ1 61 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 MDH1BQ5I0G3 518 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 RINT1Q6NUQ1 792 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 PRPF39Q86UA1 669 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 CDH24Q86UP0 819 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 CCDC13Q8IYE1 715 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 ZNF295-AS1Q8N0V1 137 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 IL22RA1Q8N6P7 574 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 TOP6BLQ8N6T0 577 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 TSEN2Q8NCE0 465 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 OR14C36Q8NHC7 312 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 MYCBPAPQ8TBZ2 947 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 PMEPA1Q969W9 287 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 KLHDC7BQ96G42 594 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 MYOCQ99972 504 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 OMDQ99983 421 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 DUSP23Q9BVJ7 150 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 RSPH9Q9H1X1 276 aaPredicted RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 METTL14Q9HCE5 456 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 DDX19AQ9NUU7 478 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 GDAP2Q9NXN4 497 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 SCML1Q9UN30 329 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 TNRC6AQ8NDV7 1962 aaKnown RBP7.2□□□□□ -1.26
CHD3-213ENST00000571249 UNC13CQ8NB66 2214 aa7.2□□□□□ -1.26
CHD3-213ENST00000571249 CUBNO60494 3623 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TLN2Q9Y4G6 2542 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 hCG_2014768A0A024R1R8 64 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3DA0A087WVF3 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3IA0A087WXS9 549 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms