RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 GCATO75600 419 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 ASS1P00966 412 aaKnown RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 IGLV3-27P01718 113 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 CD58P19256 250 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 POLR2EP19388 210 aaKnown RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 ITIH1P19827 911 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 DUSP3P51452 185 aaPredicted RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 CLDN10P78369 228 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 COG7P83436 770 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 ARID5AQ03989 594 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 GOLGA8FQ08AF8 430 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 GOLGA8DPQ0D2H9 430 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 INCA1Q0VD86 236 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 BIRC3Q13489 604 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 TRPC3Q13507 836 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 FZD2Q14332 565 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 TCEA2Q15560 299 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 E2F4Q16254 413 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 ZNF284Q2VY69 593 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 DEFB133Q30KQ1 61 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 PIP5KL1Q5T9C9 394 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 SLC35F3Q8IY50 421 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 LSMEM2Q8N112 164 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 PDILTQ8N807 584 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 ZNF548Q8NEK5 533 aaPredicted RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 ZNF507Q8TCN5 953 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 WFIKKN2Q8TEU8 576 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 PARD3BQ8TEW8 1205 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 JPH3Q8WXH2 748 aaPredicted RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 TATDN2Q93075 761 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 SYAP1Q96A49 352 aaPredicted RBP7.46□□□□□ -1.22
SMG6-205ENST00000570659 SGF29Q96ES7 293 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 TNIP3Q96KP6 325 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 PPP1R13BQ96KQ4 1090 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 BMFQ96LC9 184 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 DUSP16Q9BY84 665 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 GPR27Q9NS67 375 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 IGSF5Q9NSI5 407 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 KLHL11Q9NVR0 708 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 NCKAP1Q9Y2A7 1128 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 PCDHGA8Q9Y5G5 932 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 ITIH6Q6UXX5 1313 aa7.46□□□□□ -1.22
SMG6-205ENST00000570659 C2CD3Q4AC94 2353 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 PRAMEF33A0A0G2JMD5 474 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 A0A1W2PQM1 296 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 MUSKO15146 869 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 PRAMEF10O60809 474 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 PHACTR2O75167 634 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 IL1BP01584 269 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 HLA-DRAP01903 254 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 CYBBP04839 570 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 FYNP06241 537 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 NR1D1P20393 614 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 RBMS1P29558 406 aaKnown RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 ATICP31939 592 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 UGT1A5P35504 534 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 TKTL1P51854 596 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 PITX1P78337 314 aaPredicted RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 EIF2B5Q13144 721 aaKnown RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 ZNF177Q13360 481 aaPredicted RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 C1orf61Q13536 156 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SURF1Q15526 300 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ZACNQ401N2 412 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 RRAGBQ5VZM2 374 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 USP53Q70EK8 1073 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG6-205ENST00000570659 SV2AQ7L0J3 742 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SV2BQ7L1I2 683 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 XXYLT1Q8NBI6 393 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SLC4A11Q8NBS3 891 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 TAS1R2Q8TE23 839 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 GOLGA1Q92805 767 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SEMA4DQ92854 862 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 VOPP1Q96AW1 172 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 PLD4Q96BZ4 506 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 KLHDC7BQ96G42 594 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 SEMA3CQ99985 751 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ZSWIM1Q9BR11 485 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 CALN1Q9BXU9 219 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 DCLK3Q9C098 648 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 NLGN3Q9NZ94 848 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 PLEKHB1Q9UF11 243 aaPredicted RBP7.45□□□□□ -1.22
SMG6-205ENST00000570659 SUN2Q9UH99 717 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 ZNF510Q9Y2H8 683 aa7.45□□□□□ -1.22
SMG6-205ENST00000570659 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 NTN3O00634 580 aaPredicted RBP7.44□□□□□ -1.22
SMG6-205ENST00000570659 SCAMP1O15126 338 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 MTSS1O43312 755 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
SMG6-205ENST00000570659 GP1BAP07359 652 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 TRIM49P0CI25 452 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 TRIM49CP0CI26 452 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 RALAP11233 206 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 C5AR1P21730 350 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 ABCD1P33897 745 aa7.44□□□□□ -1.22
SMG6-205ENST00000570659 RAD23BP54727 409 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms