RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 HSPH1Q92598 858 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 PANX2Q96RD6 677 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 GABRG3Q99928 467 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 SPON2Q9BUD6 331 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 SNRNP25Q9BV90 132 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 INTS6Q9UL03 887 aaKnown RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 NENFQ9UMX5 172 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 ERVW-1Q9UQF0 538 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 INVSQ9Y283 1065 aa13.17□□□□□ -0.3
CDT1-203ENST00000569140 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
CDT1-203ENST00000569140 IGLV3-10A0A075B6K4 115 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 SOWAHDA6NJG2 315 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 DRGXA6NNA5 263 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 DAPK3O43293 454 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 LRCH4O75427 683 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
CDT1-203ENST00000569140 NNMTP40261 264 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 MAGEA1P43355 309 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 STK19P49842 368 aaPredicted RBP13.16□□□□□ -0.3
CDT1-203ENST00000569140 ECT2LQ008S8 904 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 SCAPQ12770 1279 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 PTPRNQ16849 979 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 C5orf22Q49AR2 442 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
CDT1-203ENST00000569140 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
CDT1-203ENST00000569140 OR52K2Q8NGK3 314 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
CDT1-203ENST00000569140 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 PEBP4Q96S96 227 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 CATSPERBQ9H7T0 1116 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 RAB23Q9ULC3 237 aa13.16□□□□□ -0.3
CDT1-203ENST00000569140 A0A1W2PQF6 199 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 CBX4O00257 560 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 BNIP3LO60238 219 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 RPP40O75818 363 aaKnown RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 RHOQP17081 205 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 GABRG2P18507 467 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 L1CAMP32004 1257 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 KRT83P78385 493 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 SULT2A1Q06520 285 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 MESDQ14696 234 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 ACAP1Q15027 740 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 CA9Q16790 459 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 HADHQ16836 314 aaKnown RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 SETD3Q86TU7 594 aaPredicted RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 ARFGAP1Q8N6T3 406 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 OR7D4Q8NG98 312 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 SLC35G2Q8TBE7 412 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 TTC17Q96AE7 1141 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 SPACA7Q96KW9 195 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 FEM1AQ9BSK4 669 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 ATP13A1Q9HD20 1204 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 OSGEPQ9NPF4 335 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
CDT1-203ENST00000569140 IMPACTQ9P2X3 320 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
CDT1-203ENST00000569140 A0A0D9SEW6 157 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 MAP3K13O43283 966 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 SNAP91O60641 907 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 SRPRAP08240 638 aaKnown RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 ACADMP11310 421 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 TCF4P15884 667 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 NDUFV2P19404 249 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 HOXA6P31267 233 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 PCK1P35558 622 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 PLA2G5P39877 138 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 NBL1P41271 181 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 MAPKAPK2P49137 400 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 GNA12Q03113 381 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 KRT81Q14533 505 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
CDT1-203ENST00000569140 MANEALQ5VSG8 457 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 ZBTB44Q8NCP5 570 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 RLN3Q8WXF3 142 aa13.14□□□□□ -0.31
CDT1-203ENST00000569140 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms