RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 GLI1P08151 1106 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 PDGFRAP16234 1089 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 GOT1P17174 413 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 CD38P28907 300 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 CCR1P32246 355 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 CCR5P51681 352 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 PLK1P53350 603 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 CDK17Q00537 523 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 MTA1Q13330 715 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 EIF4EBP2Q13542 120 aaPredicted RBP14.09□□□□□ -0.15
CNOT1-215ENST00000569020 ELAVL3Q14576 367 aaKnown RBP14.09□□□□□ -0.15
CNOT1-215ENST00000569020 ARHGAP44Q17R89 818 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 SLC45A4Q5BKX6 768 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 EFHC1Q5JVL4 640 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 DEFB106AQ8N104 65 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 STK40Q8N2I9 435 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 OR14C36Q8NHC7 312 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 ELF4Q99607 663 aaPredicted RBP14.09□□□□□ -0.15
CNOT1-215ENST00000569020 CRACR2AQ9BSW2 395 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 EBF2Q9HAK2 575 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 ACP6Q9NPH0 428 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 ASNSD1Q9NWL6 643 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 DDIT4Q9NX09 232 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 COX16Q9P0S2 106 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 FTSJ1Q9UET6 329 aa14.09□□□□□ -0.15
CNOT1-215ENST00000569020 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 SLC9A1P19634 815 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 MZF1P28698 734 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 STK19P49842 368 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 ADPRHP54922 357 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 SNX16P57768 344 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 PITX1P78337 314 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TAF5Q15542 800 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 CCDC157Q569K6 752 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 GBP6Q6ZN66 633 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 CIR1Q86X95 450 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D3Q8IZP1 549 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 AADATQ8N5Z0 425 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 MDM1Q8TC05 714 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 PPP1R13BQ96KQ4 1090 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 NOX5Q96PH1 765 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 SPAG5Q96R06 1193 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 PRMT1Q99873 361 aaKnown RBP14.08□□□□□ -0.16
CNOT1-215ENST00000569020 GDF3Q9NR23 364 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 RWDD2AQ9UIY3 292 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 SLC25A13Q9UJS0 675 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 IGF2RP11717 2491 aa14.08□□□□□ -0.16
CNOT1-215ENST00000569020 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 BECN2A8MW95 431 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 YKT6O15498 198 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 HSF2BPO75031 334 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 GADD45BO75293 160 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-215ENST00000569020 WNT1P04628 370 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 ITGAVP06756 1048 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 ARRB1P49407 418 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-215ENST00000569020 NUMBP49757 651 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 PTK2Q05397 1052 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 ACCSLQ4AC99 568 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 OR6B2Q6IFH4 312 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-215ENST00000569020 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 SERAC1Q96JX3 654 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 SLC2A13Q96QE2 648 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 CPXM1Q96SM3 734 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 PCDHGC3Q9UN70 934 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 GPSM3Q9Y4H4 160 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 FAM208BQ5VWN6 2430 aa14.07□□□□□ -0.16
CNOT1-215ENST00000569020 CHD6Q8TD26 2715 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-215ENST00000569020 A0A1W2PR77 199 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 GTPBP10A4D1E9 387 aaKnown RBP14.06□□□□□ -0.16
CNOT1-215ENST00000569020 SLC7A4O43246 635 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 GRAP2O75791 330 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 VAV1P15498 845 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 DRD3P35462 400 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-215ENST00000569020 NME3Q13232 169 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-215ENST00000569020 SMAD1Q15797 465 aaKnown RBP14.06□□□□□ -0.16
CNOT1-215ENST00000569020 EXOC3L4Q17RC7 722 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 PRAMEF14Q5SWL7 426 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 FAM46CQ5VWP2 391 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 SMYD5Q6GMV2 418 aa14.06□□□□□ -0.16
CNOT1-215ENST00000569020 CXorf57Q6NSI4 855 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms