RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SLCO3A1Q9UIG8 710 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
SNX29-207ENST00000568949 PRAMEF26H0Y7S4 382 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 KLK10O43240 276 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 OPA1O60313 960 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 SDC3O75056 442 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 LUC7L3O95232 432 aaKnown RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 WISP1O95388 367 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 IL1BP01584 269 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 PSMC2P35998 433 aaKnown RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 CTSOP43234 321 aaPredicted RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 TBX4P57082 545 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 GABREP78334 506 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 LY6DQ14210 128 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 STAT4Q14765 748 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 SGO2Q562F6 1265 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 FSCBQ5H9T9 825 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 RESP18Q5W5W9 173 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 TRIM69Q86WT6 500 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 CARNMT1Q8N4J0 409 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 FBXL13Q8NEE6 735 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 MED8Q96G25 268 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 PAGE5Q96GU1 130 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 THSD1Q9NS62 852 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 RAB20Q9NX57 234 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 SERTAD1Q9UHV2 236 aa12.9□□□□□ -0.34
SNX29-207ENST00000568949 TDRD6O60522 2096 aaKnown RBP12.9□□□□□ -0.34
SNX29-207ENST00000568949 ATMQ13315 3056 aa12.9□□□□□ -0.35
SNX29-207ENST00000568949 PLRG1O43660 514 aaKnown RBP12.89□□□□□ -0.35
SNX29-207ENST00000568949 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
SNX29-207ENST00000568949 LZTS3O60299 673 aaPredicted RBP12.89□□□□□ -0.35
SNX29-207ENST00000568949 RNGTTO60942 597 aaKnown RBP12.89□□□□□ -0.35
SNX29-207ENST00000568949 MYL1P05976 194 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 GP1BAP07359 652 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 CKMT1AP12532 417 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 DGKAP23743 735 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 NNMTP40261 264 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 MS4A13Q5J8X5 152 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 MMS22LQ6ZRQ5 1243 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 MYEOVQ96EZ4 313 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 KLHDC7BQ96G42 594 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 ASCL3Q9NQ33 180 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 KIAA1257Q9ULG3 409 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 PCDHA7Q9UN72 937 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
SNX29-207ENST00000568949 STX10O60499 249 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 USP12O75317 370 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 CSO75390 466 aaKnown RBP12.88□□□□□ -0.35
SNX29-207ENST00000568949 VDRP11473 427 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 LCP1P13796 627 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 MAT2AP31153 395 aaKnown RBP12.88□□□□□ -0.35
SNX29-207ENST00000568949 ME1P48163 572 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 MXI1P50539 228 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 ADAM9Q13443 819 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
SNX29-207ENST00000568949 DCAF6Q58WW2 860 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 DSG4Q86SJ6 1040 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 FCRL2Q96LA5 508 aaPredicted RBP12.88□□□□□ -0.35
SNX29-207ENST00000568949 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 EVA1BQ9NVM1 165 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
SNX29-207ENST00000568949 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 A0A1B0GVM2 712 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 K7ENP7 123 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 O00370 1275 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 SLC28A2O43868 658 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 RTN2O75298 545 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 GABBR2O75899 941 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 LTFP02788 710 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 ALPPL2P10696 532 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 CD19P15391 556 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 SKOR1P84550 965 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 NNTQ13423 1086 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 INO80CQ6PI98 192 aaPredicted RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 CFAP52Q8N1V2 620 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 CCDC97Q96F63 343 aaPredicted RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 SLC39A13Q96H72 371 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 RPL10LQ96L21 214 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms