RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	SMG8	Q8ND04	991 aa	Known RBP	12.96	□□□□□ -0.33
PKM-222	ENST00000568883	OR52K1	Q8NGK4	314 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	RDH11	Q8TC12	318 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	SCG3	Q8WXD2	468 aa	Known RBP	12.96	□□□□□ -0.33
PKM-222	ENST00000568883	BRI3BP	Q8WY22	251 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	JADE3	Q92613	823 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	PPP1R10	Q96QC0	940 aa	Known RBP	12.96	□□□□□ -0.33
PKM-222	ENST00000568883	SYT15	Q9BQS2	421 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	FAM167B	Q9BTA0	163 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	CEP41	Q9BYV8	373 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	ULBP1	Q9BZM6	244 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	AP5M1	Q9H0R1	490 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	RNF39	Q9H2S5	420 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	ANKRD6	Q9Y2G4	727 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	PSAT1	Q9Y617	370 aa		12.96	□□□□□ -0.33
PKM-222	ENST00000568883	IQCA1L	A6NCM1	817 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	KCNK1	O00180	336 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	HAS3	O00219	553 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	CLDN5	O00501	218 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	AP1G2	O75843	785 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	LTF	P02788	710 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ACAT1	P24752	427 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	DNAJB1	P25685	340 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	GALNT2	Q10471	571 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	UBAP2L	Q14157	1087 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ANKRD20A4	Q4UJ75	823 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SYPL2	Q5VXT5	272 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	METTL21C	Q5VZV1	264 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ANO7	Q6IWH7	933 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TAF2	Q6P1X5	1199 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	RIPOR1	Q6ZS17	1223 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PAQR9	Q6ZVX9	377 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	FAM35A	Q86V20	835 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NPLOC4	Q8TAT6	608 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TMEM40	Q8WWA1	233 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	IRGQ	Q8WZA9	623 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NDRG1	Q92597	394 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SPDL1	Q96EA4	605 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	EBF4	Q9BQW3	602 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	VCX3B	Q9H321	246 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	DDIT4	Q9NX09	232 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NDE1	Q9NXR1	346 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	CDH9	Q9ULB4	789 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883		Q9Y3F1	56 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PCDHB12	Q9Y5F1	795 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NR2E3	Q9Y5X4	410 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SCN1A	P35498	2009 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883		A6NHS1	94 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ITM2A	O43736	263 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SIN3B	O75182	1162 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	LYPLA1	O75608	230 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	BEST1	O76090	585 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	HSPA4L	O95757	839 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TOP3B	O95985	862 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NCAM1	P13591	858 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	CYP2B6	P20813	491 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PCSK1	P29120	753 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	CYP2C18	P33260	490 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ABL2	P42684	1182 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	NDUFV1	P49821	464 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	IDH3A	P50213	366 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	FKBP1B	P68106	108 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PITX1	P78337	314 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	CDH17	Q12864	832 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	MPP3	Q13368	585 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TUBB3	Q13509	450 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	GSTA3	Q16772	222 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	RAB41	Q5JT25	222 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TMCO4	Q5TGY1	634 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PDPK2P	Q6A1A2	396 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	MYLK4	Q86YV6	388 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	KIRREL3	Q8IZU9	778 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SMARCD1	Q96GM5	515 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SENP8	Q96LD8	212 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	ZNF184	Q99676	751 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	WDR6	Q9NNW5	1121 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	RNF19A	Q9NV58	838 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	PIH1D1	Q9NWS0	290 aa	Known RBP	12.95	□□□□□ -0.34
PKM-222	ENST00000568883	TMEM216	Q9P0N5	145 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883	SLC17A6	Q9P2U8	582 aa		12.95	□□□□□ -0.34
PKM-222	ENST00000568883		A0A096LPK6	155 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	TREH	O43280	583 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ADCY6	O43306	1168 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	MYL3	P08590	195 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ANPEP	P15144	967 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	POLD2	P49005	469 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ITGA9	Q13797	1035 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	UGP2	Q16851	508 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	KCTD11	Q693B1	232 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ADGRG6	Q86SQ4	1221 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	KCNMB4	Q86W47	210 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	DTX3L	Q8TDB6	740 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	ZNF778	Q96MU6	729 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	AGAP3	Q96P47	875 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	SORT1	Q99523	831 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	COLEC11	Q9BWP8	271 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	WDCP	Q9H6R7	721 aa		12.94	□□□□□ -0.34
PKM-222	ENST00000568883	SLC7A8	Q9UHI5	535 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms