RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IL21RQ9HBE5 538 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 AASDHPPTQ9NRN7 309 aa19.19■□□□□ 0.66
LINC01238-205ENST00000567549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.18■□□□□ 0.66
LINC01238-205ENST00000567549 A0A1W2PP55 124 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 TTC34A8MYJ7 566 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 C1QTNF3-AMACRE9PGA6 284 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 ALOX15BO15296 676 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 CALCAP01258 141 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 IL1BP01584 269 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 PSMD8P48556 350 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 ZNF177Q13360 481 aaPredicted RBP19.18■□□□□ 0.66
LINC01238-205ENST00000567549 FSCBQ5H9T9 825 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 NCEH1Q6PIU2 408 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 BAHD1Q8TBE0 780 aaPredicted RBP19.18■□□□□ 0.66
LINC01238-205ENST00000567549 NEUROG2Q9H2A3 272 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 CCDC86Q9H6F5 360 aaKnown RBP19.18■□□□□ 0.66
LINC01238-205ENST00000567549 GDF3Q9NR23 364 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 FTSJ1Q9UET6 329 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 CABIN1Q9Y6J0 2220 aa19.18■□□□□ 0.66
LINC01238-205ENST00000567549 CLDN11O75508 207 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 F9P00740 461 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 IGHV4-34P06331 123 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 CD38P28907 300 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 NOS2P35228 1153 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 CTSKP43235 329 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 KRT83P78385 493 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 BNC1Q01954 994 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 MAN2A1Q16706 1144 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 OR6B2Q6IFH4 312 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 CCNI2Q6ZMN8 369 aaPredicted RBP19.17■□□□□ 0.66
LINC01238-205ENST00000567549 SLC26A9Q7LBE3 791 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 PRPF39Q86UA1 669 aaKnown RBP19.17■□□□□ 0.66
LINC01238-205ENST00000567549 DEFB106AQ8N104 65 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 OR14C36Q8NHC7 312 aa19.17■□□□□ 0.66
LINC01238-205ENST00000567549 NYNRINQ9P2P1 1898 aaKnown RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 FRYQ5TBA9 3013 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 SYNJ2BP-COX16A0A087WUM0 186 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 GADD45BO75293 160 aaPredicted RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 DAB1O75553 588 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 PDGFRAP16234 1089 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 ZNF18P17022 549 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 SLC9A1P19634 815 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 MZF1P28698 734 aaPredicted RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 OVGP1Q12889 678 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 ACCSLQ4AC99 568 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 LRRC31Q6UY01 552 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 TMPRSS7Q7RTY8 843 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 PROSER1Q86XN7 944 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 APCDD1Q8J025 514 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 STK40Q8N2I9 435 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 PNPLA1Q8N8W4 532 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 ZNF397Q8NF99 534 aaPredicted RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 RPL10LQ96L21 214 aaKnown RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 CPXM1Q96SM3 734 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 ELF4Q99607 663 aaPredicted RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 PRMT1Q99873 361 aaKnown RBP19.16■□□□□ 0.66
LINC01238-205ENST00000567549 COX16Q9P0S2 106 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 CYTH4Q9UIA0 394 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 VPS28Q9UK41 221 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 DMTF1Q9Y222 760 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 IGF2RP11717 2491 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 KNL1Q8NG31 2342 aa19.16■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3DA0A087WVF3 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3IA0A087WXS9 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3EA0A087X179 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3KA0A087X1G2 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 A0A1B0GTQ1 180 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3FA6NER0 549 aaPredicted RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3LB9A6J9 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 E9PAM4 449 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 ITGAVP06756 1048 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3HP0C7X1 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 PON1P27169 355 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 SCNN1AP37088 669 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 CTSOP43234 321 aaPredicted RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 ADPRHP54922 357 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 CDH4P55283 916 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 SLC6A3Q01959 620 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 NME3Q13232 169 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 EIF4EBP2Q13542 120 aaPredicted RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 CAMK4Q16566 473 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3GQ6DHY5 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3CQ6IPX1 549 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 MMS22LQ6ZRQ5 1243 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TBC1D3Q8IZP1 549 aaPredicted RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 PTPRN2Q92932 1015 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 SERAC1Q96JX3 654 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 C2orf49Q9BVC5 232 aaPredicted RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 MTG2Q9H4K7 406 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 XPO7Q9UIA9 1087 aaKnown RBP19.15■□□□□ 0.66
LINC01238-205ENST00000567549 SLCO3A1Q9UIG8 710 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 DNAJC12Q9UKB3 198 aa19.15■□□□□ 0.66
LINC01238-205ENST00000567549 TMEM131Q92545 1883 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 BECN2A8MW95 431 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 H0Y8X5 98 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 M0QYT0 321 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 C1SP09871 688 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 HNF1BP35680 557 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms