RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 TAF5Q15542 800 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 CAMK4Q16566 473 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 EXOC3L4Q17RC7 722 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 GJB7Q6PEY0 223 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
UBR1-206ENST00000566493 APCDD1Q8J025 514 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 DEFB106AQ8N104 65 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 OR2T34Q8NGX1 318 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 BAHD1Q8TBE0 780 aaPredicted RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 RPL10LQ96L21 214 aaKnown RBP12.32□□□□□ -0.44
UBR1-206ENST00000566493 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 NEUROG2Q9H2A3 272 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 SYNCQ9H7C4 482 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 DDIT4Q9NX09 232 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 COX16Q9P0S2 106 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 KIAA1468Q9P260 1216 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 ITIH6Q6UXX5 1313 aa12.32□□□□□ -0.44
UBR1-206ENST00000566493 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 A0A1W2PPC4 97 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 TCAF2A6NFQ2 919 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 H0Y8X5 98 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 VILLO15195 856 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 PCDHGA12O60330 932 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 IL1BP01584 269 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 PDGFRAP16234 1089 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 GOT1P17174 413 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 KRT9P35527 623 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 CTSKP43235 329 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 SLC45A4Q5BKX6 768 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 CCNI2Q6ZMN8 369 aaPredicted RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 C11orf57Q6ZUT1 292 aaPredicted RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 DSG4Q86SJ6 1040 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 PASD1Q8IV76 773 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 STK40Q8N2I9 435 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 SLC6A18Q96N87 628 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 RPRD1AQ96P16 312 aaPredicted RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 AASDHPPTQ9NRN7 309 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 ASNSD1Q9NWL6 643 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 SERGEFQ9UGK8 458 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 SLC25A13Q9UJS0 675 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
UBR1-206ENST00000566493 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 BTBD3Q9Y2F9 522 aa12.31□□□□□ -0.44
UBR1-206ENST00000566493 AKAP13Q12802 2813 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 ASPMQ8IZT6 3477 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PLXNA2O75051 1894 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 NYNRINQ9P2P1 1898 aaKnown RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 BECN2A8MW95 431 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 TNFSF14O43557 240 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 GRAP2O75791 330 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PON1P27169 355 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 STK19P49842 368 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 CCR5P51681 352 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PLK1P53350 603 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 UBE2HP62256 183 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PITX1P78337 314 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 IL9RQ01113 521 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 NME3Q13232 169 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 ACCSLQ4AC99 568 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 CCDC157Q569K6 752 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 CIR1Q86X95 450 aaPredicted RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 GALNT15Q8N3T1 639 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 SHC3Q92529 594 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PTPRN2Q92932 1015 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 SLC2A13Q96QE2 648 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 CPXM1Q96SM3 734 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 FAM129BQ96TA1 746 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
UBR1-206ENST00000566493 ORAI3Q9BRQ5 295 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PDCL3Q9H2J4 239 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 FTSJ1Q9UET6 329 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 PTPRBP23467 1997 aa12.3□□□□□ -0.44
UBR1-206ENST00000566493 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms