RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TARSL2A2RTX5 802 aaKnown RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 E9PAM4 449 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 RNASEH1O60930 286 aaKnown RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 IGLV3-19P01714 112 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 GZMAP12544 262 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 RFC1P35251 1148 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 TPMTP51580 245 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 RSPO4Q2I0M5 234 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 C15orf59Q2T9L4 293 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 C6orf118Q5T5N4 469 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF776Q68DI1 518 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 DCUN1D2Q6PH85 259 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 RABEPKQ7Z6M1 372 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 SYT12Q8IV01 421 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 FAM172AQ8WUF8 416 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 PIGKQ92643 395 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 CENPIQ92674 756 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 MRGPRX3Q96LB0 322 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 MUC3BQ9H195 1237 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 ANLNQ9NQW6 1124 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 VPS28Q9UK41 221 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 SCML1Q9UN30 329 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 BZW2Q9Y6E2 419 aaKnown RBP20.43■□□□□ 0.86
CMTM3-211ENST00000565922 DRGXA6NNA5 263 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 I6L893 689 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 KHNYNO15037 678 aaKnown RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 DNTTP04053 509 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 RHOCP08134 193 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 MZF1P28698 734 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 PBX1P40424 430 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 VASPP50552 380 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 KRT83P78385 493 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 NRG1Q02297 640 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF33AQ06730 810 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 CCDC6Q16204 474 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 SYCP2LQ5T4T6 812 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 WDR59Q6PJI9 974 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 ARMCX6Q7L4S7 300 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 VPS36Q86VN1 386 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF683Q8IZ20 524 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 SYN2Q92777 582 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 NTAN1Q96AB6 310 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 RMDN1Q96DB5 314 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 MCEEQ96PE7 176 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 FEM1AQ9BSK4 669 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 RTKNQ9BST9 563 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 C2orf49Q9BVC5 232 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 ZYG11BQ9C0D3 744 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 RETREG1Q9H6L5 497 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 DLL3Q9NYJ7 618 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 WSB2Q9NYS7 404 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 IFNKQ9P0W0 207 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 PPARGC1AQ9UBK2 798 aaKnown RBP20.42■□□□□ 0.86
CMTM3-211ENST00000565922 CHD5Q8TDI0 1954 aa20.42■□□□□ 0.86
CMTM3-211ENST00000565922 SPTBN4Q9H254 2564 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 TCRBV5S1A1TA0A578 114 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 SRGAP2O75044 1071 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 GJB6O95452 261 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 ADRA1BP35368 520 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 PTGER3P43115 390 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 IRAK1P51617 712 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF143P52747 638 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 LIMK1P53667 647 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 SF3A2Q15428 464 aaKnown RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF783Q6ZMS7 281 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 CACUL1Q86Y37 369 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 CADM4Q8NFZ8 388 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 CEP76Q8TAP6 659 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 TRIM11Q96F44 468 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 TOE1Q96GM8 510 aaKnown RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 OSBPL2Q9H1P3 480 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 RSPH9Q9H1X1 276 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 PARVAQ9NVD7 372 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 EVLQ9UI08 416 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-211ENST00000565922 CEP250Q9BV73 2442 aa20.41■□□□□ 0.86
CMTM3-211ENST00000565922 TMCO5BA8MYB1 307 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 CBFA2T2O43439 604 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 SIN3BO75182 1162 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 CNTN5O94779 1100 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 RRM1P23921 792 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 OR1E1P30953 314 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 CTSOP43234 321 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 AIF1P55008 147 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 HDAC4P56524 1084 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 RPS14P62263 151 aaKnown RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 ZBED6P86452 979 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 GON4LQ3T8J9 2241 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 ALFQ53S48 1182 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 TDRD12Q587J7 1177 aaKnown RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 WDR45BQ5MNZ6 344 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 PEAR1Q5VY43 1037 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF571Q7Z3V5 609 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 ALG14Q96F25 216 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF419Q96HQ0 510 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 RPL10LQ96L21 214 aaKnown RBP20.4■□□□□ 0.86
CMTM3-211ENST00000565922 HSPA12BQ96MM6 686 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 CNPY3Q9BT09 278 aa20.4■□□□□ 0.86
CMTM3-211ENST00000565922 NUSAP1Q9BXS6 441 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms