RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 A0A1B0GVM2 712 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 A0A1W2PPC4 97 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 TCAF2A6NFQ2 919 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 H0Y8X5 98 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 DFNA5O60443 496 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CLDN11O75508 207 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 DAB1O75553 588 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 GJB3O75712 270 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 ADH1BP00325 375 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 IGLV3-25P01717 112 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 IGHV4-34P06331 123 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 ITGAVP06756 1048 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 VAV1P15498 845 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CDK11BP21127 795 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 CD38P28907 300 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 GGCXP38435 758 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 ANP32AP39687 249 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 PLK1P53350 603 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CDH4P55283 916 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 RACK1P63244 317 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 KRT83P78385 493 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 IL9RQ01113 521 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CENPCQ03188 943 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 EIF4EBP2Q13542 120 aaPredicted RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 STAT4Q14765 748 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 ARID5BQ14865 1188 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 DLG2Q15700 870 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 POM121L1PQ3SYA9 428 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 PTPN20Q4JDL3 420 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 C2CD6Q53TS8 623 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SLC45A4Q5BKX6 768 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 TCP11X2Q5H9J9 407 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 MIIPQ5JXC2 388 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 FKBP15Q5T1M5 1219 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 FAM102AQ5T9C2 384 aaPredicted RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 FAM46CQ5VWP2 391 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SASS6Q6UVJ0 657 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 OLFML1Q6UWY5 402 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 LAYNQ6UX15 382 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SLC26A9Q7LBE3 791 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 DSG4Q86SJ6 1040 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 PHLDB2Q86SQ0 1253 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 C14orf80Q86SX3 495 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 PRPF39Q86UA1 669 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 SLCO6A1Q86UG4 719 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 ATP11CQ8NB49 1132 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 MSANTD4Q8NCY6 345 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 OR2T34Q8NGX1 318 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 C1orf216Q8TAB5 229 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 OR8D1Q8WZ84 308 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SERAC1Q96JX3 654 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 CDC6Q99741 560 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SPON2Q9BUD6 331 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 STK33Q9BYT3 514 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 OSGEPQ9NPF4 335 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 PIGVQ9NUD9 493 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 TAB2Q9NYJ8 693 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 RRN3Q9NYV6 651 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 SERGEFQ9UGK8 458 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 PAXBP1Q9Y5B6 917 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 RIF1Q5UIP0 2472 aaKnown RBP6.6□□□□□ -1.35
TCF4-228ENST00000565393 USP34Q70CQ2 3546 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 OTOGLQ3ZCN5 2332 aa6.6□□□□□ -1.35
TCF4-228ENST00000565393 PTPRDP23468 1912 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TMEM8BA6NDV4 472 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 DRGXA6NNA5 263 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 PLK4O00444 970 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 VILLO15195 856 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 FLRT2O43155 660 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 CBFA2T3O75081 653 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 RTN2O75298 545 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 CNTN5O94779 1100 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 GFPT2O94808 682 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ENDOD1O94919 500 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ADCY5O95622 1261 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 RHOCP08134 193 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 MMEP08473 750 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ATXN1LP0C7T5 689 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 ZNF883P0CG24 379 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 UCHL3P15374 230 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 EEF1GP26641 437 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 OR1E1P30953 314 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 MAT2AP31153 395 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 RECQLP46063 649 aaPredicted RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 GRIA4P48058 902 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 CXCR3P49682 368 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 DNA2P51530 1060 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 IRAK1P51617 712 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 CCR5P51681 352 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 POLR2FP61218 127 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 CCDC15Q0P6D6 951 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ELAVL3Q14576 367 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 SLC25A52Q3SY17 297 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 KCNT1Q5JUK3 1230 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 BRMS1LQ5PSV4 323 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms