RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MED10Q9BTT4 135 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.43□□□□□ -1.861e-6■■■■□ 25.3
CHD9-213ENST00000564845 RAB9BQ9NP90 201 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HAO1Q9UJM8 370 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GRID1Q9ULK0 1009 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TLL2Q9Y6L7 1015 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 A0A1W2PQJ5 194 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GLTPD2A6NH11 291 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NPIPA7E9PJI5 369 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PGRMC1O00264 195 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 NVLO15381 856 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 CLTAP09496 248 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NPIPA8P0DM63 369 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HOXC13P31276 330 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NR2C2P49116 596 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ARSEP51690 589 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ABRQ12979 859 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PPIL2Q13356 520 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CUL2Q13617 745 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PTK2BQ14289 1009 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TTLL9Q3SXZ7 439 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 LRRC57Q8N9N7 239 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ANKLE1Q8NAG6 615 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 INPP4AQ96PE3 977 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 EVA1AQ9H8M9 152 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GBA2Q9HCG7 927 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 TRPM5Q9NZQ8 1165 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.43□□□□□ -1.866e-8■■■□□ 15.1
CHD9-213ENST00000564845 COL4A6Q14031 1691 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C9JVG2 144 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NRG2O14511 850 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 PQBP1O60828 265 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 VPS4BO75351 444 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 E2F6O75461 281 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 KCNA4P22459 653 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CHRNA3P32297 505 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MARSP56192 900 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 MXRA7P84157 204 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GTF2BQ00403 316 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SLC10A2Q12908 348 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 WSCD1Q658N2 575 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MTHFD1LQ6UB35 978 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SCN4BQ8IWT1 228 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 KBTBD2Q8IY47 623 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TRIML2Q8N7C3 387 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SCFD2Q8WU76 684 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NR4A3Q92570 626 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ELOVL4Q9GZR5 314 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CAB39LQ9H9S4 337 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PRDM8Q9NQV8 689 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C20orf96Q9NUD7 363 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 CHCHD3Q9NX63 227 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 MAFBQ9Y5Q3 323 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 MGAQ8IWI9 3026 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 A8MXQ7 604 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ATP9BO43861 1147 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NQO1P15559 274 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 MBTD1Q05BQ5 628 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 RPS6KA2Q15349 733 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SOWAHAQ2M3V2 549 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TIMM50Q3ZCQ8 353 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 FAM183BPQ6ZVS7 135 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 RFX6Q8HWS3 928 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MAP4K3Q8IVH8 894 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 KCTD6Q8NC69 237 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 AGO3Q9H9G7 860 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 MAN1C1Q9NR34 630 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SEPT3Q9UH03 358 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 DCDC2Q9UHG0 476 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PCDHGA3Q9Y5H0 932 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ASGR1P07306 291 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 INHBAP08476 426 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MCF2P10911 925 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 AMPD1P23109 780 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PSMA2P25787 234 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GKP32189 559 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 POLD2P49005 469 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SERPINB9P50453 376 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 BCAP31P51572 246 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TMBIM6P55061 237 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 INAQ16352 499 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TMEM44Q2T9K0 475 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GOLGA7BQ2TAP0 167 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SLC45A4Q5BKX6 768 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 DSG4Q86SJ6 1040 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C11orf74Q86VG3 221 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MIB1Q86YT6 1006 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SLC2A14Q8TDB8 520 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 LRRC46Q96FV0 321 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CCDC90BQ9GZT6 254 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 WNT8AQ9H1J5 351 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SCOCQ9UIL1 159 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF510Q9Y2H8 683 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CNTNAP2Q9UHC6 1331 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FAM95CA0A1B0GW59 222 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MYBPHLA2RUH7 354 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FBXO21O94952 628 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ABCB1P08183 1280 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms