RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GRK2P25098 689 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 XIAPP98170 497 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 JADE1Q6IE81 842 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RPS27LQ71UM5 84 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 KRT27Q7Z3Y8 459 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FERMT1Q9BQL6 677 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MINDY3Q9H8M7 445 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ARHGAP10A1A4S6 786 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 BCLAF3A2AJT9 711 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LACTBL1A8MY62 500 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PIGNO95427 931 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZNF460Q14592 562 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZNF423Q2M1K9 1284 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GOLGA7BQ2TAP0 167 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 KRT80Q6KB66 452 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ARNTL2Q8WYA1 636 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SERPINI1Q99574 410 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TMEM79Q9BSE2 394 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RNF11Q9Y3C5 154 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NRXN2Q9P2S2 1712 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 EPHX2P34913 555 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MTX3Q5HYI7 312 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 POTEAQ6S8J7 498 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CCDC185Q8N715 623 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PDCD6IPQ8WUM4 868 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SLC29A1Q99808 456 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SIKE1Q9BRV8 207 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MKS1Q9NXB0 559 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SLC39A10Q9ULF5 831 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CDY2AQ9Y6F7 541 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CDY1Q9Y6F8 540 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GJA3Q9Y6H8 435 aa20.94■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ARHGEF37A1IGU5 675 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TPST1O60507 370 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PIGRP01833 764 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LCP1P13796 627 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 STAT5BP51692 787 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FSTL4Q6MZW2 842 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GK5Q6ZS86 529 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 DNAAF3Q8N9W5 541 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MFSD3Q96ES6 412 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PCYT2Q99447 389 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TASP1Q9H6P5 420 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RPF1Q9H9Y2 349 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MTMR10Q9NXD2 777 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 DTLQ9NZJ0 730 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZDHHC2Q9UIJ5 367 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CLCN3P51790 818 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LPIN1Q14693 890 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PPP1R26Q5T8A7 1209 aaPredicted RBP20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ANKRD23Q86SG2 305 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NUP93Q8N1F7 819 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CPB2Q96IY4 423 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZNF510Q9Y2H8 683 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RGSL1A5PLK6 1076 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NDST2P52849 883 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 BOLA3Q53S33 107 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ARL13AQ5H913 290 aaPredicted RBP20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NBPF12Q5TAG4 269 aaPredicted RBP20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ATF7IP2Q5U623 682 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CDKL3Q8IVW4 592 aaPredicted RBP20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PNPLA1Q8N8W4 532 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RNF169Q8NCN4 708 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 APBA2Q99767 749 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PCDHB12Q9Y5F1 795 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SNX9Q9Y5X1 595 aa20.93■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CILPO75339 1184 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MAGEA3P43357 314 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 HARS2P49590 506 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 HTR3CQ8WXA8 447 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LRRC39Q96DD0 335 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SFMBT1Q9UHJ3 866 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RAB26Q9ULW5 256 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 KCNU1A8MYU2 1149 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CLIC3O95833 236 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 IMPDH2P12268 514 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TGM2P21980 687 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ME2P23368 584 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NR1H2P55055 460 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 TMEM132BQ14DG7 1078 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 LY6KQ17RY6 165 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PID1Q7Z2X4 250 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MCUQ8NE86 351 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ZFRQ96KR1 1074 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SLC39A3Q9BRY0 314 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 NOL11Q9H8H0 719 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 EBF1Q9UH73 591 aa20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RSL24D1Q9UHA3 163 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 MAFBQ9Y5Q3 323 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PDLIM1O00151 329 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 GPR25O00155 361 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RNF103O00237 685 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PIGGQ5H8A4 983 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CLVS1Q8IUQ0 354 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 HPDLQ96IR7 371 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ILKAPQ9H0C8 392 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 AP4E1Q9UPM8 1137 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 C2P06681 752 aa20.91■□□□□ 0.94
MAP1LC3B-206ENST00000564844 IQCF3P0C7M6 154 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms