RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ERCC2P18074 760 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 SLC6A4P31645 630 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 IFNAR2P48551 515 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 DYNLT1P63172 113 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 ANGPT1Q15389 498 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 MANEALQ5VSG8 457 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 TTC39BQ5VTQ0 682 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 RFWD3Q6PCD5 774 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 BBS12Q6ZW61 710 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 BZW1Q7L1Q6 419 aaKnown RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 CCDC117Q8IWD4 279 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 FAM217AQ8IXS0 508 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 ZNF687Q8N1G0 1237 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 TTC13Q8NBP0 860 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 FAM3CQ92520 227 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 ATOH1Q92858 354 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 FAM83CQ9BQN1 747 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 DUS2Q9NX74 493 aaKnown RBP17.43■□□□□ 0.38
CMTM3-208ENST00000564247 GTSE1Q9NYZ3 720 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 CACNA1IQ9P0X4 2223 aa17.43■□□□□ 0.38
CMTM3-208ENST00000564247 IGLV3-10A0A075B6K4 115 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 GOLGA6L10A0A0M3HER8 536 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 TRDMT1O14717 391 aaKnown RBP17.42■□□□□ 0.38
CMTM3-208ENST00000564247 TGM2P21980 687 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 HOXC13P31276 330 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 RPS9P46781 194 aaKnown RBP17.42■□□□□ 0.38
CMTM3-208ENST00000564247 FZD5Q13467 585 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 DPYSQ14117 519 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 C5orf22Q49AR2 442 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 RALGPS2Q86X27 583 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-208ENST00000564247 ZNF683Q8IZ20 524 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 LZTR1Q8N653 840 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 PQLC3Q8N755 202 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-208ENST00000564247 RIN3Q8TB24 985 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 DDI1Q8WTU0 396 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 IGSF8Q969P0 613 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 HOMER3Q9NSC5 361 aa17.42■□□□□ 0.38
CMTM3-208ENST00000564247 USP34Q70CQ2 3546 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 WASH4PA8MWX3 477 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 KRIT1O00522 736 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 CLDN11O75508 207 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 SERPINB6P35237 376 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 NR2C2P49116 596 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 CDH4P55283 916 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ZNF177Q13360 481 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 PDGFRLQ15198 375 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ITPRIPL2Q3MIP1 535 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 SLC9A4Q6AI14 798 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ANKS1BQ7Z6G8 1248 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ADAT2Q7Z6V5 191 aaKnown RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 C1orf210Q8IVY1 113 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 CFAP52Q8N1V2 620 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 CEP112Q8N8E3 955 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 OSCP1Q8WVF1 389 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 P3H4Q92791 437 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 FRMD8P1Q9BZ68 369 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 LINC00597Q9H2U6 94 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 MPP6Q9NZW5 540 aa17.41■□□□□ 0.38
CMTM3-208ENST00000564247 NDRG2Q9UN36 371 aaKnown RBP17.41■□□□□ 0.38
CMTM3-208ENST00000564247 SPECC1L-ADORA2AF8WAN1 911 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 TBL1XO60907 577 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 APOC2P02655 101 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 CTHP32929 405 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 TNK2Q07912 1038 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 KLF1Q13351 362 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-208ENST00000564247 PAFAH1B3Q15102 231 aaKnown RBP17.4■□□□□ 0.38
CMTM3-208ENST00000564247 MPP7Q5T2T1 576 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 TPGS1Q6ZTW0 290 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 CHST9Q7L1S5 443 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 PLD5Q8N7P1 536 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 RTL3Q8N8U3 475 aaKnown RBP17.4■□□□□ 0.38
CMTM3-208ENST00000564247 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 HPS4Q9NQG7 708 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 RRAGDQ9NQL2 400 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-208ENST00000564247 FAM86C1Q9NVL1 165 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 TMEM248Q9NWD8 314 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 HEY1Q9Y5J3 304 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 WNT6Q9Y6F9 365 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 DOCK4Q8N1I0 1966 aa17.4■□□□□ 0.38
CMTM3-208ENST00000564247 DMDP11532 3685 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 A0A1B0GVM2 712 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 TCAF2A6NFQ2 919 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 DCLK1O15075 740 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 CNTN5O94779 1100 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 NFATC1O95644 943 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 OR1E1P30953 314 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 NBL1P41271 181 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 SOX9P48436 509 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 MAPKAPK2P49137 400 aa17.39■□□□□ 0.37
CMTM3-208ENST00000564247 RPS24P62847 133 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms