RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 DCAKDQ8WVC6 231 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TBCBQ99426 244 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 PRPF19Q9UMS4 504 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TMA7Q9Y2S6 64 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 SLIT2O94813 1529 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TOP3BO95985 862 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 ZNF143P52747 638 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 ARPP19P56211 112 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 APPL2Q8NEU8 664 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 FAM162AQ96A26 154 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 OSBPL11Q9BXB4 747 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CLUHO75153 1309 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 MYOCOSA0A1B0GUC4 107 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TRIM38O00635 465 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CRTAMO95727 393 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CCDC159P0C7I6 412 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CSH1P0DML2 217 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CSH2P0DML3 217 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CDH3P22223 829 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 SGO1Q5FBB7 561 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 METTL23Q86XA0 190 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 ACMSDQ8TDX5 336 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 FAR2Q96K12 515 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 HERPUD2Q9BSE4 406 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CDH19Q9H159 772 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 SP110Q9HB58 689 aa12.85□□□□□ -0.35
COMMD4-209ENST00000564068 TRNAU1APQ9NX07 287 aaKnown RBP12.85□□□□□ -0.35
COMMD4-209ENST00000564068 CXorf49A8MYA2 514 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PSMB9P28065 219 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SLC5A3P53794 718 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SLC18A1P54219 525 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 CSE1LP55060 971 aaKnown RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 DGCR6Q14129 220 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 DMC1Q14565 340 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 NOMO1Q15155 1222 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 KCTD4Q8WVF5 259 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 RMDN1Q96DB5 314 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SPON2Q9BUD6 331 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 STN1Q9H668 368 aaKnown RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PRMT7Q9NVM4 692 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PPME1Q9Y570 386 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 SOCS7O14512 581 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 FKBP9O95302 570 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 CYP1A1P04798 512 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 FKBP9P1Q75LS8 142 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 CPB2Q96IY4 423 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ASPSCR1Q9BZE9 553 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ZNF358Q9NW07 568 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 TMEM216Q9P0N5 145 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 HACL1Q9UJ83 578 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ITM2AO43736 263 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PLIN3O60664 434 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ASS1P00966 412 aaKnown RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 C2P06681 752 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 IVDP26440 423 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 TM4SF1P30408 202 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 IDH3AP50213 366 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 RAP1GDS1P52306 607 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 GBE1Q04446 702 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 LDLRAP1Q5SW96 308 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 ZNF781Q8N8C0 355 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 C9orf16Q9BUW7 83 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 GPR88Q9GZN0 384 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 POMKQ9H5K3 350 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 APOBEC3GQ9HC16 384 aaKnown RBP12.84□□□□□ -0.35
COMMD4-209ENST00000564068 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 NDUFAF1Q9Y375 327 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 LRP6O75581 1613 aa12.84□□□□□ -0.35
COMMD4-209ENST00000564068 A0A0A0MRY4 1105 aa12.83□□□□□ -0.35
COMMD4-209ENST00000564068 FAM149AA5PLN7 773 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms