RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NAA35Q5VZE5 725 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 SMYD5Q6GMV2 418 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 SASS6Q6UVJ0 657 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 LAYNQ6UX15 382 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 C14orf80Q86SX3 495 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 XYLT1Q86Y38 959 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 NAXDQ8IW45 347 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 KDM1BQ8NB78 822 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 CPA5Q8WXQ8 436 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 PCMTD1Q96MG8 357 aaPredicted RBP18.21■□□□□ 0.51
NME3-205ENST00000563854 TBCBQ99426 244 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 NPY6RQ99463 290 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 STK33Q9BYT3 514 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 ADAM33Q9BZ11 813 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 GANQ9H2C0 597 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 WDCPQ9H6R7 721 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 GAREM1Q9H706 876 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 SLC25A13Q9UJS0 675 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 SCML1Q9UN30 329 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 ITIH6Q6UXX5 1313 aa18.21■□□□□ 0.51
NME3-205ENST00000563854 NUMA1Q14980 2115 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 NYNRINQ9P2P1 1898 aaKnown RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 UPK3BL1B0FP48 263 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 UPK3BL2E5RIL1 263 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 CER1O95813 267 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 IL1BP01584 269 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 SLC8A1P32418 973 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 CDH5P33151 784 aaPredicted RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 AFF3P51826 1226 aaKnown RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 OXCT1P55809 520 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 POLR2FP61218 127 aaKnown RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 FAM193AP78312 1265 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 SFSWAPQ12872 951 aaKnown RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 MTA1Q13330 715 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 TEAD4Q15561 434 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 CDKAL1Q5VV42 579 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 KIAA0895LQ68EN5 471 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
NME3-205ENST00000563854 OR52K2Q8NGK3 314 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 EPS8L1Q8TE68 723 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 MUC3BQ9H195 1237 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 FANCLQ9NW38 375 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 VPS28Q9UK41 221 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 PCDHB9Q9Y5E1 797 aa18.2■□□□□ 0.5
NME3-205ENST00000563854 CHD8Q9HCK8 2581 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 BNIP3LO60238 219 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 GJB3O75712 270 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 LSM8O95777 96 aaKnown RBP18.19■□□□□ 0.5
NME3-205ENST00000563854 ZNF18P17022 549 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 NOMO3P69849 1222 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 BNC1Q01954 994 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 SLC14A1Q13336 389 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 ARID5BQ14865 1188 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 HLA-BQ31612 363 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 BRMS1LQ5PSV4 323 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 NCEH1Q6PIU2 408 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 USP30Q70CQ3 517 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 PHLDB2Q86SQ0 1253 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 SETD7Q8WTS6 366 aaKnown RBP18.19■□□□□ 0.5
NME3-205ENST00000563854 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 NEUROG2Q9H2A3 272 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 ANLNQ9NQW6 1124 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
NME3-205ENST00000563854 FNDC3AQ9Y2H6 1198 aaKnown RBP18.19■□□□□ 0.5
NME3-205ENST00000563854 LRRC72A6NJI9 287 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 HYAL3O43820 417 aaPredicted RBP18.18■□□□□ 0.5
NME3-205ENST00000563854 CLDN11O75508 207 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 CNTN5O94779 1100 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 RHOCP08134 193 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 CD27P26842 260 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 FLT3P36888 993 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 GABRB2P47870 512 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 CXCR3P49682 368 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 GALCP54803 685 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 ELAVL3Q14576 367 aaKnown RBP18.18■□□□□ 0.5
NME3-205ENST00000563854 POM121L1PQ3SYA9 428 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 AADATQ8N5Z0 425 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 ANKRD20A12PQ8NF67 263 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 C1orf216Q8TAB5 229 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 PTPRN2Q92932 1015 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 CFAP57Q96MR6 1250 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 PPP1R9BQ96SB3 815 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 FAM129BQ96TA1 746 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 FEM1AQ9BSK4 669 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 SCNM1Q9BWG6 230 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 METTL5Q9NRN9 209 aaKnown RBP18.18■□□□□ 0.5
NME3-205ENST00000563854 TM7SF3Q9NS93 570 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 ARHGEF38Q9NXL2 777 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 PAXBP1Q9Y5B6 917 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 SNX11Q9Y5W9 270 aa18.18■□□□□ 0.5
NME3-205ENST00000563854 EPHB6O15197 1021 aa18.17■□□□□ 0.5
NME3-205ENST00000563854 ADH1BP00325 375 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms