RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 MFSD10Q14728 455 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 UGP2Q16851 508 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 MZB1Q8WU39 189 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 CLPTM1LQ96KA5 538 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 SENP8Q96LD8 212 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 A0A0A0MRY4 1105 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 TPP1O14773 563 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 MTSS1O43312 755 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 AP1G1O43747 822 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 MT-CO1P00395 513 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 SERPINA6P08185 405 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 YBX3P16989 372 aaKnown RBP eCLIP10.68□□□□□ -0.71e-7■□□□□ 11.3
RNF40-204ENST00000563683 GP5P40197 560 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 ETV4P43268 484 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 NUDT2P50583 147 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 SLC18A2Q05940 514 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 CA9Q16790 459 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 EML3Q32P44 896 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 ALDH16A1Q8IZ83 802 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 B3GALNT2Q8NCR0 500 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 CLEC4CQ8WTT0 213 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 SPATA13Q96N96 652 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 BEGAINQ9BUH8 593 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 DPEP3Q9H4B8 488 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 THAP1Q9NVV9 213 aa10.68□□□□□ -0.7
RNF40-204ENST00000563683 A0A096LPK6 155 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PFDN6O15212 129 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 BDNFP23560 247 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 ZNF235Q14590 738 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 KRT80Q6KB66 452 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 UNC93AQ86WB7 457 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TNS4Q8IZW8 715 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 APBA2Q99767 749 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 SIKE1Q9BRV8 207 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 ZNF670Q9BS34 389 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 C2CD4BA6NLJ0 364 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 DCXO43602 365 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TADA2AO75478 443 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 F9P00740 461 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 RABGGTBP53611 331 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 ADARP55265 1226 aaKnown RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 YWHAHQ04917 246 aaPredicted RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 MFSD14CQ5VZR4 134 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 UNC5AQ6ZN44 842 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 DDIASQ8IXT1 998 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 RNF148Q8N7C7 305 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 SLC44A1Q8WWI5 657 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 APBB2Q92870 758 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 ZFP42Q96MM3 310 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TKTL2Q9H0I9 626 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 COL16A1Q07092 1604 aaPredicted RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 FZD9O00144 591 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PEX1O43933 1283 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PDE5AO76074 875 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 SMIM10L2AP0DMW4 78 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 SMIM10L2BP0DMW5 78 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 LMO2P25791 158 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 NOS2P35228 1153 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 GRM5P41594 1212 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PCDH19Q8TAB3 1148 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PYDC1Q8WXC3 89 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 WNT8BQ93098 351 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 EFHD1Q9BUP0 239 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TRPV6Q9H1D0 765 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 POPDC2Q9HBU9 364 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 PLK2Q9NYY3 685 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.67□□□□□ -0.7
RNF40-204ENST00000563683 STYXL1Q9Y6J8 313 aa10.67□□□□□ -0.7
RNF40-204ENST00000563683 STRCQ7RTU9 1775 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 hCG_2014768A0A024R1R8 64 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 PHGDHO43175 533 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 PAPSS1O43252 624 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 TSPAN1O60635 241 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 LYPLA1O75608 230 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 VAPBO95292 243 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
RNF40-204ENST00000563683 GFAPP14136 432 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 NPR3P17342 541 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 ERCC2P18074 760 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 DCTN2Q13561 401 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 OASLQ15646 514 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 SFT2D3Q587I9 215 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 IQSEC1Q6DN90 963 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 RBM44Q6ZP01 1051 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 C15orf39Q6ZRI6 1047 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CMC1Q7Z7K0 106 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 GSTCDQ8NEC7 633 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 DDI1Q8WTU0 396 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 LPPQ93052 612 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 P2RY11Q96G91 374 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CSPG4P5Q96PW8 444 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 MAGEB5Q9BZ81 275 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 SDCBP2Q9H190 292 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 XPNPEP3Q9NQH7 507 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms