RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 EME1Q96AY2 570 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 SORT1Q99523 831 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 MRPL1Q9BYD6 325 aaKnown RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 FAM49AQ9H0Q0 323 aaPredicted RBP12.09□□□□□ -0.47
ABCA3-203ENST00000563623 CDH19Q9H159 772 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PREBQ9HCU5 417 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 TNFSF13BQ9Y275 285 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 HES2Q9Y543 173 aa12.09□□□□□ -0.47
ABCA3-203ENST00000563623 PPEF2O14830 753 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 LTFP02788 710 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 ATP5BP06576 529 aaKnown RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 IQCF3P0C7M6 154 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 CD1EP15812 388 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 ARRB2P32121 409 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 THOP1P52888 689 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 USP46P62068 366 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 MAP3K10Q02779 954 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 USP10Q14694 798 aaKnown RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 TLR1Q15399 786 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 PAOXQ6QHF9 649 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 DNAJC28Q9NX36 388 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 MOCS1Q9NZB8 636 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 PGAP2Q9UHJ9 254 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 SF3B1O75533 1304 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■■■■ 136.5
ABCA3-203ENST00000563623 CSPG5O95196 566 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 MT-CO1P00395 513 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 TUBB3Q13509 450 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 C16orf89Q6UX73 402 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 ILDR2Q71H61 639 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 TMC7Q7Z402 723 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 TMEM110Q86TL2 294 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 TP53INP2Q8IXH6 220 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 PCDH20Q8N6Y1 951 aaKnown RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 CHST13Q8NET6 341 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 DTNBP1Q96EV8 351 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 SIKE1Q9BRV8 207 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 VPS33BQ9H267 617 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 DPEP3Q9H4B8 488 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 NMRAL1Q9HBL8 299 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 BCAP29Q9UHQ4 241 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 PSMD13Q9UNM6 376 aa12.08□□□□□ -0.48
ABCA3-203ENST00000563623 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
ABCA3-203ENST00000563623 FAM163BP0C2L3 166 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 FAM200BP0CF97 657 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 INSRRP14616 1297 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 ARF4P18085 180 aaPredicted RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 ATICP31939 592 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 ICAM3P32942 547 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 SERPINB8P50452 374 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MBTD1Q05BQ5 628 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 GK3PQ14409 553 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 SOWAHAQ2M3V2 549 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 DSELQ8IZU8 1212 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 DEFB106AQ8N104 65 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MFSD3Q96ES6 412 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 QKIQ96PU8 341 aaKnown RBP eCLIP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MPHOSPH6Q99547 160 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 FZD8Q9H461 694 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 TK2O00142 265 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 C2P06681 752 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 RPL5P46777 297 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 PRAMEP78395 509 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 POU5F1BQ06416 359 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 PDK1Q15118 436 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 NAPRTQ6XQN6 538 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MED10Q9BTT4 135 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 CAAP1Q9H8G2 361 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 MKS1Q9NXB0 559 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 NADK2Q4G0N4 442 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 TREML2Q5T2D2 321 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 ATG14Q6ZNE5 492 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 DGCR14Q96DF8 476 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 GPR20Q99678 358 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 NPAS2Q99743 824 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 OMDQ99983 421 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 STN1Q9H668 368 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 VANGL2Q9ULK5 521 aa12.07□□□□□ -0.48
ABCA3-203ENST00000563623 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 RUVBL2Q9Y230 463 aaKnown RBP12.07□□□□□ -0.48
ABCA3-203ENST00000563623 M0QYT0 321 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 PLSCR1O15162 318 aa12.06□□□□□ -0.48
ABCA3-203ENST00000563623 CRTAMO95727 393 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms