RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PIGOQ8TEQ8 1089 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 AUTS2Q8WXX7 1259 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 IFT81Q8WYA0 676 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MAGOHBQ96A72 148 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FUBP3Q96I24 572 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 GBP5Q96PP8 586 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SLX1AQ9BQ83 275 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 CENPKQ9BS16 269 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 TUBGCP2Q9BSJ2 902 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 LRFN3Q9BTN0 628 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 LDAHQ9H6V9 325 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 TLE6Q9H808 572 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 IFT122Q9HBG6 1241 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DDX43Q9NXZ2 648 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 CNOT8Q9UFF9 292 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 INTUQ9ULD6 942 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 C10orf71Q711Q0 1435 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 ACEP12821 1306 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SETD1BQ9UPS6 1966 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CCDC162PA2VCL2 907 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 LAD1O00515 517 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 ZNF263O14978 683 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 WDR46O15213 610 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 RAD51CO43502 376 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CEP104O60308 925 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 E2F6O75461 281 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 DCTN3O75935 186 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 GFPT2O94808 682 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 MOCS3O95396 460 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SERPING1P05155 500 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 IFIT1P09914 478 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SPATA31D3P0C874 917 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TPBGLP0DKB5 382 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CHN1P15882 459 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 FGFR4P22455 802 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 HOXC9P31274 260 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 MCAMP43121 646 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 GUCY2FP51841 1108 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SLC18A1P54219 525 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 ORC2Q13416 577 aaPredicted RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SNX1Q13596 522 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 HLTFQ14527 1009 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SLC9C1Q4G0N8 1177 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 DAB2IPQ5VWQ8 1189 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TTI2Q6NXR4 508 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 PDXDC1Q6P996 788 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SYCE2Q6PIF2 218 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CCDC174Q6PII3 467 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TSHZ1Q6ZSZ6 1077 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SPATA31D4Q6ZUB0 917 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 DDX46Q7L014 1031 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 NELFCDQ8IXH7 590 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 LRRC34Q8IZ02 419 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 NME8Q8N427 588 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 SMYD1Q8NB12 490 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 PPFIBP2Q8ND30 876 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 ZNF398Q8TD17 642 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 DYDC1Q8WWB3 177 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 STON2Q8WXE9 905 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 PAWRQ96IZ0 340 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 Q96MF0 132 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 AGAP3Q96P47 875 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TSPAN18Q96SJ8 248 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 KRT12Q99456 494 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 PABPC3Q9H361 631 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 LY9Q9HBG7 655 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TRPV5Q9NQA5 729 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TMEM74BQ9NUR3 256 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 FOXJ2Q9P0K8 574 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 LNPEPQ9UIQ6 1025 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 RASAL2Q9UJF2 1139 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 FBXL5Q9UKA1 691 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 UTP11Q9Y3A2 253 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 L3MBTL1Q9Y468 752 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 BZW2Q9Y6E2 419 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 AFDNP55196 1824 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 KIF13BQ9NQT8 1826 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 ARFGEF2Q9Y6D5 1785 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 BTBD18B2RXH4 712 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 NVLO15381 856 aaKnown RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 RGS16O15492 202 aaPredicted RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 PEX11AO75192 247 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 TCEA3O75764 348 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 FGAP02671 866 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 AMY1AP04745 511 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 KRT16P08779 473 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CALM1P0DP23 149 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CALM2P0DP24 149 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CALM3P0DP25 149 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 POU3F3P20264 500 aaPredicted RBP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 FDXRP22570 491 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 CDC25AP30304 524 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 MATR3P43243 847 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC01416-201ENST00000563553 MTNR1BP49286 362 aa3.7□□□□□ -1.82
LINC01416-201ENST00000563553 KCNJ2P63252 427 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms