RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 CNTN5O94779 1100 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 KRT3P12035 628 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 SDC4P31431 198 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 RPS14P62263 151 aaKnown RBP19.58■□□□□ 0.72
TRADD-203ENST00000563348 TPM4P67936 248 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 IRX4P78413 519 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 ATP11AP98196 1134 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 FOXK2Q01167 660 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 C1QBPQ07021 282 aaKnown RBP19.58■□□□□ 0.72
TRADD-203ENST00000563348 SKOR2Q2VWA4 1001 aaPredicted RBP19.58■□□□□ 0.72
TRADD-203ENST00000563348 STPG1Q5TH74 334 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 RNF219Q5W0B1 726 aaPredicted RBP19.58■□□□□ 0.72
TRADD-203ENST00000563348 LRRC31Q6UY01 552 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 MON1BQ7L1V2 547 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 LUZP1Q86V48 1076 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 FAM131BQ86XD5 332 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 CENPIQ92674 756 aaPredicted RBP19.58■□□□□ 0.72
TRADD-203ENST00000563348 FEM1AQ9BSK4 669 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 SYT11Q9BT88 431 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 EDEM3Q9BZQ6 932 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 TMPRSS4Q9NRS4 437 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 OR51B4Q9Y5P0 310 aa19.58■□□□□ 0.72
TRADD-203ENST00000563348 ITIH6Q6UXX5 1313 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 IGLV3-10A0A075B6K4 115 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 DCDC2BA2VCK2 349 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 LRRC53A6NM62 1247 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 SIGLEC16A6NMB1 481 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 TTC34A8MYJ7 566 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 SIN3BO75182 1162 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 GJB6O95452 261 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 TNFAIP3P21580 790 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 RFC1P35251 1148 aaPredicted RBP19.57■□□□□ 0.72
TRADD-203ENST00000563348 NNMTP40261 264 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 PTPN9P43378 593 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 VASPP50552 380 aaPredicted RBP19.57■□□□□ 0.72
TRADD-203ENST00000563348 C15orf59Q2T9L4 293 aaPredicted RBP19.57■□□□□ 0.72
TRADD-203ENST00000563348 ALFQ53S48 1182 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 ARTNQ5T4W7 220 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 C9orf64Q5T6V5 341 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 ACAD10Q6JQN1 1059 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 CACUL1Q86Y37 369 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 C3orf20Q8ND61 904 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 CADM4Q8NFZ8 388 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 OR52K2Q8NGK3 314 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 CEP76Q8TAP6 659 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 RPL10LQ96L21 214 aaKnown RBP19.57■□□□□ 0.72
TRADD-203ENST00000563348 HSPA12BQ96MM6 686 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 SELENOOQ9BVL4 669 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 GPR174Q9BXC1 333 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 RSPH9Q9H1X1 276 aaPredicted RBP19.57■□□□□ 0.72
TRADD-203ENST00000563348 AIPL1Q9NZN9 384 aa19.57■□□□□ 0.72
TRADD-203ENST00000563348 KNL1Q8NG31 2342 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 EDDM13A0A1B0GTR0 161 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 TCRBV5S1A1TA0A578 114 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 LNP1A1A4G5 178 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 E9PAM4 449 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 ADRA1BP35368 520 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 FANCCQ00597 558 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 ZSCAN23Q3MJ62 389 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 RAB6CQ53S08 254 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 TRIM61Q5EBN2 209 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 SYCP2LQ5T4T6 812 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 SH3PXD2AQ5TCZ1 1133 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 ZNF776Q68DI1 518 aaPredicted RBP19.56■□□□□ 0.72
TRADD-203ENST00000563348 SLC23A3Q6PIS1 610 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 WDR59Q6PJI9 974 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 STRADAQ7RTN6 431 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 TTYH3Q9C0H2 523 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 RAB6CQ9H0N0 254 aa19.56■□□□□ 0.72
TRADD-203ENST00000563348 MUC22E2RYF6 1773 aaPredicted RBP19.55■□□□□ 0.72
TRADD-203ENST00000563348 TM4SF5O14894 197 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 RNASEH1O60930 286 aaKnown RBP19.55■□□□□ 0.72
TRADD-203ENST00000563348 SRGAP2O75044 1071 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 DNTTP04053 509 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 STK19P49842 368 aaPredicted RBP19.55■□□□□ 0.72
TRADD-203ENST00000563348 ASIC2Q16515 512 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 CDO1Q16878 200 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 DUOXA1Q1HG43 343 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 ARL13BQ3SXY8 428 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 FIGNQ5HY92 759 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 WDR45BQ5MNZ6 344 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 IL31Q6EBC2 164 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 PPP1R2P3Q6NXS1 205 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 RABEPKQ7Z6M1 372 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 SETD3Q86TU7 594 aaPredicted RBP19.55■□□□□ 0.72
TRADD-203ENST00000563348 MCOLN2Q8IZK6 566 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 DNASE2BQ8WZ79 361 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 PTPRN2Q92932 1015 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 VCPIP1Q96JH7 1222 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 FAM129BQ96TA1 746 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 EDEM2Q9BV94 578 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 NUSAP1Q9BXS6 441 aaKnown RBP19.55■□□□□ 0.72
TRADD-203ENST00000563348 MPP6Q9NZW5 540 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 SCML1Q9UN30 329 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 SLC6A14Q9UN76 642 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 NUMA1Q14980 2115 aa19.55■□□□□ 0.72
TRADD-203ENST00000563348 ATXN2Q99700 1313 aaKnown RBP19.54■□□□□ 0.72
TRADD-203ENST00000563348 METTL12A8MUP2 240 aa19.54■□□□□ 0.72
TRADD-203ENST00000563348 GOLGA6L19H0YKK7 550 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms