RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CA9Q16790 459 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ACBD5Q5T8D3 534 aaPredicted RBP8.79□□□□□ -1
UBR1-204ENST00000563239 ANO7Q6IWH7 933 aa8.79□□□□□ -1
UBR1-204ENST00000563239 SCYL2Q6P3W7 929 aa8.79□□□□□ -1
UBR1-204ENST00000563239 LRRC31Q6UY01 552 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ASCL5Q7RTU5 278 aa8.79□□□□□ -1
UBR1-204ENST00000563239 TFAP2DQ7Z6R9 452 aa8.79□□□□□ -1
UBR1-204ENST00000563239 SLFN11Q7Z7L1 901 aa8.79□□□□□ -1
UBR1-204ENST00000563239 CPNE8Q86YQ8 564 aa8.79□□□□□ -1
UBR1-204ENST00000563239 FRMD1Q8N878 549 aa8.79□□□□□ -1
UBR1-204ENST00000563239 UCMAQ8WVF2 138 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ATRIPQ8WXE1 791 aa8.79□□□□□ -1
UBR1-204ENST00000563239 BTBD6Q96KE9 485 aa8.79□□□□□ -1
UBR1-204ENST00000563239 NUP85Q9BW27 656 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ZYG11BQ9C0D3 744 aa8.79□□□□□ -1
UBR1-204ENST00000563239 SLC6A17Q9H1V8 727 aa8.79□□□□□ -1
UBR1-204ENST00000563239 EPC1Q9H2F5 836 aa8.79□□□□□ -1
UBR1-204ENST00000563239 MTG2Q9H4K7 406 aa8.79□□□□□ -1
UBR1-204ENST00000563239 MRPL47Q9HD33 250 aaKnown RBP8.79□□□□□ -1
UBR1-204ENST00000563239 SPTLC3Q9NUV7 552 aa8.79□□□□□ -1
UBR1-204ENST00000563239 NDFIP2Q9NV92 336 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ZNHIT6Q9NWK9 470 aaKnown RBP8.79□□□□□ -1
UBR1-204ENST00000563239 GPATCH2LQ9NWQ4 482 aa8.79□□□□□ -1
UBR1-204ENST00000563239 SLCO3A1Q9UIG8 710 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ERVW-1Q9UQF0 538 aa8.79□□□□□ -1
UBR1-204ENST00000563239 SCINQ9Y6U3 715 aa8.79□□□□□ -1
UBR1-204ENST00000563239 A0A0D9SEW6 157 aa8.78□□□□□ -1
UBR1-204ENST00000563239 PRR23AA6NEV1 266 aa8.78□□□□□ -1
UBR1-204ENST00000563239 DCLK1O15075 740 aa8.78□□□□□ -1
UBR1-204ENST00000563239 AKR1B10O60218 316 aa8.78□□□□□ -1
UBR1-204ENST00000563239 ASLP04424 464 aa8.78□□□□□ -1
UBR1-204ENST00000563239 ATP5BP06576 529 aaKnown RBP8.78□□□□□ -1
UBR1-204ENST00000563239 NDUFV2P19404 249 aa8.78□□□□□ -1
UBR1-204ENST00000563239 L1CAMP32004 1257 aa8.78□□□□□ -1
UBR1-204ENST00000563239 COPAP53621 1224 aa8.78□□□□□ -1
UBR1-204ENST00000563239 AIF1P55008 147 aa8.78□□□□□ -1
UBR1-204ENST00000563239 ECT2LQ008S8 904 aa8.78□□□□□ -1
UBR1-204ENST00000563239 CAMK2GQ13555 558 aaPredicted RBP8.78□□□□□ -1
UBR1-204ENST00000563239 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
UBR1-204ENST00000563239 ARL13BQ3SXY8 428 aa8.78□□□□□ -1
UBR1-204ENST00000563239 RNF219Q5W0B1 726 aaPredicted RBP8.78□□□□□ -1
UBR1-204ENST00000563239 TXNRD3NBQ6F5E7 133 aa8.78□□□□□ -1
UBR1-204ENST00000563239 SDE2Q6IQ49 451 aa8.78□□□□□ -1
UBR1-204ENST00000563239 ZC3H14Q6PJT7 736 aaKnown RBP8.78□□□□□ -1
UBR1-204ENST00000563239 SERPINA13PQ6UXR4 307 aa8.78□□□□□ -1
UBR1-204ENST00000563239 SETD3Q86TU7 594 aaPredicted RBP8.78□□□□□ -1
UBR1-204ENST00000563239 ZNF366Q8N895 744 aa8.78□□□□□ -1
UBR1-204ENST00000563239 NIPA2Q8N8Q9 360 aa8.78□□□□□ -1
UBR1-204ENST00000563239 KDM1BQ8NB78 822 aa8.78□□□□□ -1
UBR1-204ENST00000563239 HMGB4Q8WW32 186 aa8.78□□□□□ -1
UBR1-204ENST00000563239 GAB3Q8WWW8 586 aa8.78□□□□□ -1
UBR1-204ENST00000563239 MRGPRX1Q96LB2 322 aa8.78□□□□□ -1
UBR1-204ENST00000563239 CCDC42Q96M95 316 aa8.78□□□□□ -1
UBR1-204ENST00000563239 TPSD1Q9BZJ3 242 aa8.78□□□□□ -1
UBR1-204ENST00000563239 MKRN2Q9H000 416 aaKnown RBP8.78□□□□□ -1
UBR1-204ENST00000563239 SEMA4AQ9H3S1 761 aa8.78□□□□□ -1
UBR1-204ENST00000563239 NOL6Q9H6R4 1146 aaKnown RBP8.78□□□□□ -1
UBR1-204ENST00000563239 POLMQ9NP87 494 aaPredicted RBP8.78□□□□□ -1
UBR1-204ENST00000563239 CD93Q9NPY3 652 aa8.78□□□□□ -1
UBR1-204ENST00000563239 PRSS16Q9NQE7 514 aa8.78□□□□□ -1
UBR1-204ENST00000563239 PCSK1NQ9UHG2 260 aa8.78□□□□□ -1
UBR1-204ENST00000563239 MBD1Q9UIS9 605 aaPredicted RBP8.78□□□□□ -1
UBR1-204ENST00000563239 PLA2G4CQ9UP65 541 aa8.78□□□□□ -1
UBR1-204ENST00000563239 INVSQ9Y283 1065 aa8.78□□□□□ -1
UBR1-204ENST00000563239 LAMA1P25391 3075 aa8.77□□□□□ -1
UBR1-204ENST00000563239 DOCK4Q8N1I0 1966 aa8.77□□□□□ -1
UBR1-204ENST00000563239 CKAP5Q14008 2032 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 ILVBLA1L0T0 632 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 TTC34A8MYJ7 566 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 SNAP91O60641 907 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 RPP40O75818 363 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 ZMPSTE24O75844 475 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 LCA5LO95447 670 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 MT-CO1P00395 513 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 EPHX1P07099 455 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 RHOCP08134 193 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 SRPRAP08240 638 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 H2AFZP0C0S5 128 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 TMEM253P0C7T8 217 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 RHOQP17081 205 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 BCKDHBP21953 392 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 GLDCP23378 1020 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 CDC25BP30305 580 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 CNR2P34972 360 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 PCK1P35558 622 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 P2RY2P41231 377 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 STK19P49842 368 aaPredicted RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 OXCT1P55809 520 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 SLC25A11Q02978 314 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 PIGHQ14442 188 aaPredicted RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 ACAP1Q15027 740 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 HNRNPA1L2Q32P51 320 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 FNDC3BQ53EP0 1204 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 ERMARDQ5T6L9 678 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 C9orf64Q5T6V5 341 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 H2AFVQ71UI9 128 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 KBTBD6Q86V97 674 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 CCDC117Q8IWD4 279 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms