RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ATP11AP98196 1134 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 ENPP2Q13822 863 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 C15orf59Q2T9L4 293 aaPredicted RBP17.08■□□□□ 0.32
CDT1-202ENST00000562747 MAP7D1Q3KQU3 841 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 C5orf22Q49AR2 442 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 PPP1R15BQ5SWA1 713 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 KIAA1211LQ6NV74 962 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 ADIPOR2Q86V24 386 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 VSTM4Q8IW00 320 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 KDF1Q8NAX2 398 aaPredicted RBP17.08■□□□□ 0.32
CDT1-202ENST00000562747 CENPIQ92674 756 aaPredicted RBP17.08■□□□□ 0.32
CDT1-202ENST00000562747 LMLNQ96KR4 655 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 C1orf74Q96LT6 269 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 RPRD1AQ96P16 312 aaPredicted RBP17.08■□□□□ 0.32
CDT1-202ENST00000562747 HAPLN3Q96S86 360 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 SCNM1Q9BWG6 230 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 FSCN3Q9NQT6 498 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 ANLNQ9NQW6 1124 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 VANGL2Q9ULK5 521 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 ZFYVE26Q68DK2 2539 aa17.08■□□□□ 0.32
CDT1-202ENST00000562747 TCRBV21S2A2A0A5A6 115 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 H0Y626 953 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 I6L893 689 aaPredicted RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 FTLP02792 175 aaPredicted RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 ATP5BP06576 529 aaKnown RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 MAPK8P45983 427 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 LMAN2Q12907 356 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 CDO1Q16878 200 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 ARL13BQ3SXY8 428 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 MBLAC2Q68D91 279 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 DCUN1D2Q6PH85 259 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 LPCAT2Q7L5N7 544 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 FAM131BQ86XD5 332 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 IGSF8Q969P0 613 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 MCEEQ96PE7 176 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 ISCUQ9H1K1 167 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 PARVAQ9NVD7 372 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 CACNA2D2Q9NY47 1150 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 KIAA1522Q9P206 1035 aaPredicted RBP17.07■□□□□ 0.32
CDT1-202ENST00000562747 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDT1-202ENST00000562747 STON1Q9Y6Q2 735 aa17.07■□□□□ 0.32
CDT1-202ENST00000562747 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 A0A1W2PQF6 199 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 TPM1P09493 284 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 MYBL1P10243 752 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 HOXB3P14651 431 aaPredicted RBP17.06■□□□□ 0.32
CDT1-202ENST00000562747 DESP17661 470 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 ENGP17813 658 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 POLR2EP19388 210 aaKnown RBP17.06■□□□□ 0.32
CDT1-202ENST00000562747 IL12RB1P42701 662 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 WASP42768 502 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 ZNF143P52747 638 aaPredicted RBP17.06■□□□□ 0.32
CDT1-202ENST00000562747 OXCT1P55809 520 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 SLC12A1Q13621 1099 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 ZNF234Q14588 700 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 C14orf80Q86SX3 495 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 SYT12Q8IV01 421 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 FAM172AQ8WUF8 416 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 TTC17Q96AE7 1141 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 SPACA7Q96KW9 195 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDT1-202ENST00000562747 CD248Q9HCU0 757 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 ADAMTS1Q9UHI8 967 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 PLA2G4CQ9UP65 541 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 PI4KAP42356 2102 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 PKD1L2Q7Z442 2459 aa17.06■□□□□ 0.32
CDT1-202ENST00000562747 WASH3PC4AMC7 463 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 ZBTB24O43167 697 aaPredicted RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 MAP3K13O43283 966 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 HYAL3O43820 417 aaPredicted RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 CLDN11O75508 207 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 MOCS3O95396 460 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 ASLP04424 464 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 DLDP09622 509 aaKnown RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 ITPKAP23677 461 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 GGCXP38435 758 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 CDH4P55283 916 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 HDAC4P56524 1084 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 MAMLD1Q13495 774 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 STARD3Q14849 445 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 ARID5BQ14865 1188 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 FUT11Q495W5 492 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 FSCBQ5H9T9 825 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 LRRC31Q6UY01 552 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 CIR1Q86X95 450 aaPredicted RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 ZNF683Q8IZ20 524 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 OR8K1Q8NGG5 319 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 SORCS1Q8WY21 1168 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms