RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SUPT3HO75486 399 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 CXCL14O95715 111 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 TAS2R40P59535 323 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 IFT88Q13099 833 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ARMC3Q5W041 872 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 SLC25A41Q8N5S1 370 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ALG3Q92685 438 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 ULK4Q96C45 1275 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 PCED1BQ96HM7 432 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 MRPL40Q9NQ50 206 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 WDR91A4D1P6 747 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 HIST1H2AGP0C0S8 130 aaPredicted RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 ERCC2P18074 760 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 HIST1H2ADP20671 130 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 MMP13P45452 471 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 NOMO1Q15155 1222 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 FAM83EQ2M2I3 478 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 TIGD5Q53EQ6 642 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 KDM7AQ6ZMT4 941 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 PLEKHO2Q8TD55 490 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 HIST1H2AHQ96KK5 128 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 HIST1H2AJQ99878 128 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 H2AFJQ9BTM1 129 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 C11orf84Q9BUA3 381 aaPredicted RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 FICDQ9BVA6 458 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 PTPRHQ9HD43 1115 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 NDE1Q9NXR1 346 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 TBC1D14Q9P2M4 693 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 SUN2Q9UH99 717 aa7.72□□□□□ -1.17
TCF4-216ENST00000562680 R3HDM2Q9Y2K5 976 aaKnown RBP7.72□□□□□ -1.17
TCF4-216ENST00000562680 TRIM49D1C9J1S8 452 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 HAS3O00219 553 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PDE2AO00408 941 aaPredicted RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 CLDN5O00501 218 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 CLDN11O75508 207 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 ATP5BP06576 529 aaKnown RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 SLC5A3P53794 718 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 FPGSQ05932 587 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 KLC1Q07866 573 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 KRT33BQ14525 404 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 FAXCQ5TGI0 409 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PDPK2PQ6A1A2 396 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PMF1Q6P1K2 205 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 NLRP14Q86W24 1093 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 SERPINI1Q99574 410 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 SLC39A3Q9BRY0 314 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 TMBIM4Q9HC24 238 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 VPS45Q9NRW7 570 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 RGS18Q9NS28 235 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 DCDC2Q9UHG0 476 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 CRLS1Q9UJA2 301 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 BLOC1S6Q9UL45 172 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PLA2G4CQ9UP65 541 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 COL11A2P13942 1736 aaPredicted RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 ADGRA2Q96PE1 1338 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 CBX4O00257 560 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 RBL1P28749 1068 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 MAGEA11P43364 429 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 MAPRE2Q15555 327 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PTRHD1Q6GMV3 140 aaKnown RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 ADAM32Q8TC27 787 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 DQX1Q8TE96 717 aaKnown RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 FAM84AQ96KN4 292 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 ELAC2Q9BQ52 826 aaKnown RBP7.71□□□□□ -1.17
TCF4-216ENST00000562680 OSBPL10Q9BXB5 764 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 IL22Q9GZX6 179 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 SYTL2Q9HCH5 934 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 RNF19AQ9NV58 838 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PHF24Q9UPV7 400 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 INSL6Q9Y581 213 aa7.71□□□□□ -1.17
TCF4-216ENST00000562680 PHIPQ8WWQ0 1821 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 HGSO14964 777 aaPredicted RBP7.71□□□□□ -1.18
TCF4-216ENST00000562680 GPR32O75388 356 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 STBD1O95210 358 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 RHOQP17081 205 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 GP5P40197 560 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 NDUFV1P49821 464 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 ARFIP2P53365 341 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PPARDQ03181 441 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.71□□□□□ -1.18
TCF4-216ENST00000562680 DUPD1Q68J44 220 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 LMO3Q8TAP4 145 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 MAML1Q92585 1016 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PGM2Q96G03 612 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 ELMO2Q96JJ3 720 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 SLC13A1Q9BZW2 595 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 CD248Q9HCU0 757 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 SIX4Q9UIU6 781 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 EDIL3O43854 480 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 S100A1P23297 94 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PRKAA2P54646 552 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 POLR2LP62875 67 aaKnown RBP7.71□□□□□ -1.18
TCF4-216ENST00000562680 TAF10Q12962 218 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 MPP3Q13368 585 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 AGAP9Q5VTM2 703 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 PALB2Q86YC2 1186 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 TMEM192Q8IY95 271 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 KAT2BQ92831 832 aa7.71□□□□□ -1.18
TCF4-216ENST00000562680 KLHL29Q96CT2 875 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms