RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FLOT1O75955 427 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 HMGB1P09429 215 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 CASTP20810 708 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 SLC16A2P36021 539 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 SLC1A4P43007 532 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 CTCFP49711 727 aaPredicted RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 PDE6CP51160 858 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 NEK2P51955 445 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 HOXA4Q00056 320 aaPredicted RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 SATB1Q01826 763 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 SP3Q02447 781 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 ST3GAL1Q11201 340 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 IFIT1BQ5T764 474 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 APOA5Q6Q788 366 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 BLOC1S2Q6QNY1 142 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 Q6ZWC4 215 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 PARS2Q7L3T8 475 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 ANKRD13CQ8N6S4 541 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 PNLDC1Q8NA58 520 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 CD99L2Q8TCZ2 262 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 HPS3Q969F9 1004 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 ZNF48Q96MX3 618 aaPredicted RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 UBAC1Q9BSL1 405 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 MOV10L1Q9BXT6 1211 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 C22orf23Q9BZE7 217 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 UPF3BQ9BZI7 483 aaKnown RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 KAT14Q9H8E8 782 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 JMJD4Q9H9V9 463 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 HOXC10Q9NYD6 342 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 GJD2Q9UKL4 321 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 MED16Q9Y2X0 877 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 RABGAP1Q9Y3P9 1069 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 RIPK3Q9Y572 518 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 HTTP42858 3142 aa5.19□□□□□ -1.58
SMG1-206ENST00000562668 FRMPD2Q68DX3 1309 aaPredicted RBP5.19□□□□□ -1.58
SMG1-206ENST00000562668 H7C1Q1 480 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 MOSPD3O75425 235 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 PLEKHA8P1O95397 391 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 LARGE1O95461 756 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 BMP15O95972 392 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 ALDH2P05091 517 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 PARP1P09874 1014 aaKnown RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 RXRAP19793 462 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 PSMA5P28066 241 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 LRPAP1P30533 357 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 STAT2P52630 851 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 RCAN1P53805 252 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 OAZ1P54368 228 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 AK2P54819 239 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 SNAP25P60880 206 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 IRX3P78415 501 aaPredicted RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 ASPRV1Q53RT3 343 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 GPATCH4Q5T3I0 446 aaKnown RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 SLC2A7Q6PXP3 512 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 KIRREL2Q6UWL6 708 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 TMTC3Q6ZXV5 915 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 FAM160B2Q86V87 743 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 CHSY1Q86X52 802 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 RAB11FIP4Q86YS3 637 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 GRAMD1CQ8IYS0 662 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 ADGRF4Q8IZF3 695 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 TMTC2Q8N394 836 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 SRBD1Q8N5C6 995 aaKnown RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 GPRC5AQ8NFJ5 357 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 SMCR8Q8TEV9 937 aaPredicted RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 XAGE5Q8WWM1 108 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 SOCS4Q8WXH5 440 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 DAZAP1Q96EP5 407 aaKnown RBP5.18□□□□□ -1.58
SMG1-206ENST00000562668 ASB2Q96Q27 587 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 CGRRF1Q99675 332 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 UBA5Q9GZZ9 404 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 SPATC1LQ9H0A9 340 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 XPR1Q9UBH6 696 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 TPCN1Q9ULQ1 816 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 GABRQQ9UN88 632 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 CYP46A1Q9Y6A2 500 aa5.18□□□□□ -1.58
SMG1-206ENST00000562668 KLF18A0A0U1RQI7 1052 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 ERICH2A1L162 156 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 KLRF2D3W0D1 207 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 EIF5BO60841 1220 aaKnown RBP5.17□□□□□ -1.58
SMG1-206ENST00000562668 OFD1O75665 1012 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 CTDNEP1O95476 244 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 TOP3BO95985 862 aaKnown RBP5.17□□□□□ -1.58
SMG1-206ENST00000562668 ICAM1P05362 532 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 PF4V1P10720 104 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 SFPQP23246 707 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMG1-206ENST00000562668 PSMC4P43686 418 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 UCP3P55916 312 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 WNT3P56703 355 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 RAB1AP62820 205 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 GHRHRQ02643 423 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 GRB14Q14449 540 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 CDC37Q16543 378 aaPredicted RBP5.17□□□□□ -1.58
SMG1-206ENST00000562668 CCDC96Q2M329 555 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 QRICH1Q2TAL8 776 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 GPR142Q7Z601 462 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 SLC15A3Q8IY34 581 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 GALNT16Q8N428 558 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms