RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 PLXNA2O75051 1894 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 TBC1D3BA6NDS4 549 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 C3orf70A6NLC5 250 aaPredicted RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 USP27XA6NNY8 438 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 H0Y626 953 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 SNAP91O60641 907 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 ADAM23O75077 832 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 IPO7O95373 1038 aaKnown RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 PTMAP06454 111 aaKnown RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 RHOQP17081 205 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 DRD1P21728 446 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 AVPR2P30518 371 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 ACVRL1P37023 503 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 WASP42768 502 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 STK19P49842 368 aaPredicted RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 CLCN5P51795 746 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 AIF1P55008 147 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 CDH4P55283 916 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 TPI1P60174 286 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 CCDC173Q0VFZ6 552 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 GRSF1Q12849 480 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLK3-208ENST00000562626 MTAPQ13126 283 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 CDH18Q13634 790 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 DPYSL3Q14195 570 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 LLGL1Q15334 1064 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 PLEKHG6Q3KR16 790 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 PITRM1Q5JRX3 1037 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 RNF219Q5W0B1 726 aaPredicted RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 C11orf63Q6NUN7 778 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 RFX8Q6ZV50 586 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 POLNQ7Z5Q5 900 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 REXO1L1PQ8IX06 675 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 MAML2Q8IZL2 1156 aaPredicted RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 CCDC33Q8N5R6 958 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 ALLCQ8N6M5 410 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 ZNF366Q8N895 744 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 RPLP0P6Q8NHW5 317 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 MRGPRX3Q96LB0 322 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 HERPUD2Q9BSE4 406 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 FEM1AQ9BSK4 669 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 CHRDQ9H2X0 955 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 TMEM248Q9NWD8 314 aa10.06□□□□□ -0.8
CLK3-208ENST00000562626 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
CLK3-208ENST00000562626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 TYW5A2RUC4 315 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 PRR33A8MZF0 331 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 SGK1O00141 431 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 EEF2KO00418 725 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 DCLK1O15075 740 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CLDN11O75508 207 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 PALMO75781 387 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 FTCDO95954 541 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 RHOCP08134 193 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CCDC175P0C221 793 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 HLA-EP13747 358 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ERCC2P18074 760 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 PRKCHP24723 683 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 EPHB2P29323 1055 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 IL12RB1P42701 662 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 TNFRSF4P43489 277 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CDH6P55285 790 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 AMPD2Q01433 879 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 SATB1Q01826 763 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ADCY2Q08462 1091 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 KIF5AQ12840 1032 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ZNF177Q13360 481 aaPredicted RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 BOLA3Q53S33 107 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 FAM182AQ5T1J6 154 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 AADACL2Q6P093 401 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 LRRC31Q6UY01 552 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ARHGAP36Q6ZRI8 547 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 DAAM2Q86T65 1068 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 NT5DC3Q86UY8 548 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ARHGAP12Q8IWW6 846 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ZNF513Q8N8E2 541 aaPredicted RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 RTL3Q8N8U3 475 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 IL17RCQ8NAC3 791 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 TXNDC5Q8NBS9 432 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 PCDH19Q8TAB3 1148 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 LRRN4Q8WUT4 740 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ALG3Q92685 438 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 COL26A1Q96A83 441 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CELF6Q96J87 481 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 CSPG4P5Q96PW8 444 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 NELL2Q99435 816 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 EPAS1Q99814 870 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CIPCQ9C0C6 399 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CD248Q9HCU0 757 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 LUC7LQ9NQ29 371 aaKnown RBP10.05□□□□□ -0.8
CLK3-208ENST00000562626 LZTFL1Q9NQ48 299 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
CLK3-208ENST00000562626 CACNA2D2Q9NY47 1150 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms