RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 EIF3CQ99613 913 aaKnown RBP17.19■□□□□ 0.34
CLK3-207ENST00000562389 EPAS1Q99814 870 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 SNRNP25Q9BV90 132 aaKnown RBP17.19■□□□□ 0.34
CLK3-207ENST00000562389 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 USP18Q9UMW8 372 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 PLA2G4CQ9UP65 541 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 AP4E1Q9UPM8 1137 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 OR51B4Q9Y5P0 310 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 CACNA1HO95180 2353 aa17.19■□□□□ 0.34
CLK3-207ENST00000562389 GOLGA6L6A8MZA4 724 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 WASH3PC4AMC7 463 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 ALDH1A2O94788 518 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 RHOCP08134 193 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 RHOQP17081 205 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 OR1E1P30953 314 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 HTR7P34969 479 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 FNTBP49356 437 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 SULT2A1Q06520 285 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 SERPINA13PQ6UXR4 307 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 ZNF783Q6ZMS7 281 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 TFAP2DQ7Z6R9 452 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 RHOT2Q8IXI1 618 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 KDM1BQ8NB78 822 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 MYO19Q96H55 970 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 FEM1AQ9BSK4 669 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 TMEM245Q9H330 911 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 FAM86C1Q9NVL1 165 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 TMEM248Q9NWD8 314 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 PCSK1NQ9UHG2 260 aa17.18■□□□□ 0.34
CLK3-207ENST00000562389 NYNRINQ9P2P1 1898 aaKnown RBP17.18■□□□□ 0.34
CLK3-207ENST00000562389 TCRBV21S2A2A0A5A6 115 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 ILVBLA1L0T0 632 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 MTA2O94776 668 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
CLK3-207ENST00000562389 PRKCHP24723 683 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 MAPKAPK2P49137 400 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 STARD3Q14849 445 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 TCEAL1Q15170 157 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 FNDC3BQ53EP0 1204 aaKnown RBP17.17■□□□□ 0.34
CLK3-207ENST00000562389 DAB2IPQ5VWQ8 1189 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 RNF219Q5W0B1 726 aaPredicted RBP17.17■□□□□ 0.34
CLK3-207ENST00000562389 HEATR6Q6AI08 1181 aaKnown RBP17.17■□□□□ 0.34
CLK3-207ENST00000562389 RWDD4Q6NW29 188 aaKnown RBP17.17■□□□□ 0.34
CLK3-207ENST00000562389 MDGA1Q8NFP4 955 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 SLC35G2Q8TBE7 412 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 ATRIPQ8WXE1 791 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 MRGPRX3Q96LB0 322 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 OSGEPQ9NPF4 335 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 GPATCH2LQ9NWQ4 482 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 ERVW-1Q9UQF0 538 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 RAD54BQ9Y620 910 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 R4GN57 208 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 WDFY4Q6ZS81 3184 aa17.17■□□□□ 0.34
CLK3-207ENST00000562389 PLXND1Q9Y4D7 1925 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 AXIN1O15169 862 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 CREB3O43889 395 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 PROSCO94903 275 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 NDUFA10O95299 355 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 IL1R2P27930 398 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 EPHB2P29323 1055 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 MAN1A1P33908 653 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 CNR2P34972 360 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 CTSOP43234 321 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 MAGEA1P43355 309 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 PXNP49023 591 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 ZNF135P52742 658 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 ST8SIA6P61647 398 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 ECT2LQ008S8 904 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 SLC25A11Q02978 314 aaKnown RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 SPA17Q15506 151 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 CA9Q16790 459 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 BOLA3Q53S33 107 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 ANO7Q6IWH7 933 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 KIAA1211LQ6NV74 962 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 TMEM139Q8IV31 216 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 PSMB7Q99436 277 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 BAG1Q99933 345 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 MUC3BQ9H195 1237 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 DHX35Q9H5Z1 703 aaKnown RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 LUC7LQ9NQ29 371 aaKnown RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 VPS28Q9UK41 221 aa17.16■□□□□ 0.34
CLK3-207ENST00000562389 EPN1Q9Y6I3 576 aaPredicted RBP17.16■□□□□ 0.34
CLK3-207ENST00000562389 WASH4PA8MWX3 477 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 PROB1E7EW31 1015 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 FGF10O15520 208 aaPredicted RBP17.15■□□□□ 0.34
CLK3-207ENST00000562389 SYNCRIPO60506 623 aaKnown RBP17.15■□□□□ 0.34
CLK3-207ENST00000562389 EPHX1P07099 455 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 HLA-EP13747 358 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 TCF4P15884 667 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 GABRG2P18507 467 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 TPI1P60174 286 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 KRT83P78385 493 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 RTL3Q8N8U3 475 aaKnown RBP17.15■□□□□ 0.34
CLK3-207ENST00000562389 DCAF4L2Q8NA75 395 aa17.15■□□□□ 0.34
CLK3-207ENST00000562389 TEKT4Q8WW24 435 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms