RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HPCAL4Q9UM19 191 aa14.65□□□□□ -0.06
COMMD4-205ENST00000562310 ARHGAP26Q9UNA1 814 aa14.65□□□□□ -0.06
COMMD4-205ENST00000562310 CHD5Q8TDI0 1954 aa14.65□□□□□ -0.06
COMMD4-205ENST00000562310 CEP290O15078 2479 aa14.65□□□□□ -0.06
COMMD4-205ENST00000562310 EIF3HO15372 352 aaKnown RBP eCLIP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 RAMP2O60895 175 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 CLDN11O75508 207 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 KLKB1P03952 638 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 SLC6A4P31645 630 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 PMS2P54278 862 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 IFI35P80217 286 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 GPS2Q13227 327 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 KCNJ11Q14654 390 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 KCTD19Q17RG1 926 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ANO4Q32M45 955 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ALFQ53S48 1182 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ANKRD20A2Q5SQ80 823 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 GPR158Q5T848 1215 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ANKRD20A1Q5TYW2 823 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ANKRD20A3Q5VUR7 823 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 TRMT10CQ7L0Y3 403 aaKnown RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 TFAP2DQ7Z6R9 452 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ADGRD2Q7Z7M1 963 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 RELL1Q8IUW5 271 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 FAM217AQ8IXS0 508 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 CCDC33Q8N5R6 958 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 NAT8LQ8N9F0 302 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 HJURPQ8NCD3 748 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 CCDC110Q8TBZ0 833 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 TIFAQ96CG3 184 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 MRPL38Q96DV4 380 aaKnown RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 CELF6Q96J87 481 aaKnown RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 PKNOX2Q96KN3 472 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 PPP1R2P1Q96PQ5 205 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 SLC22A12Q96S37 553 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 TASP1Q9H6P5 420 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 EIF2B3Q9NR50 452 aaKnown RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 RAB6BQ9NRW1 208 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 GKN1Q9NS71 199 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 HCFC1R1Q9NWW0 138 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 SEPT10Q9P0V9 454 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 KLHL8Q9P2G9 620 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 DNMT3BQ9UBC3 853 aaKnown RBP14.64□□□□□ -0.07
COMMD4-205ENST00000562310 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 SH3BP1Q9Y3L3 701 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 NOTCH4Q99466 2003 aa14.64□□□□□ -0.07
COMMD4-205ENST00000562310 GOLGA6L7A0A1B0GV03 622 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 A0A1B0GVM2 712 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 TCAF2A6NFQ2 919 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 RASA4BC9J798 803 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 PER2O15055 1255 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 RASA4O43374 803 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CNTN5O94779 1100 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 TPSB2P20231 275 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 PTPN3P26045 913 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 AVPR1AP37288 418 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 ETFBP38117 255 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 NRIP1P48552 1158 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 IRAK1P51617 712 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 ARL4CP56559 192 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CDK16Q00536 496 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 WASHC5Q12768 1159 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 SEMA5AQ13591 1074 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 TPSAB1Q15661 275 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 PRSS36Q5K4E3 855 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 C6orf118Q5T5N4 469 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 HTR3DQ70Z44 454 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CENPUQ71F23 418 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 RBM23Q86U06 439 aaKnown RBP14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 ADAMTS19Q8TE59 1207 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 ZNF707Q96C28 371 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-205ENST00000562310 PRICKLE1Q96MT3 831 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CYP2S1Q96SQ9 504 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 RUFY1Q96T51 708 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 SLC39A8Q9C0K1 460 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 PIDD1Q9HB75 910 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 IGSF9Q9P2J2 1179 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 ATP8A1Q9Y2Q0 1164 aa14.63□□□□□ -0.07
COMMD4-205ENST00000562310 CCDC195A0A1B0GUA6 201 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 E2F8A0AVK6 867 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 GOLGA6BA6NDN3 693 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 E7EVH7 732 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 MATN3O15232 486 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 SASH3O75995 380 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 TCF3P15923 654 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 OR1E1P30953 314 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 HSD17B3P37058 310 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 CCR2P41597 374 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 PAPOLAP51003 745 aaKnown RBP14.62□□□□□ -0.07
COMMD4-205ENST00000562310 CBLBQ13191 982 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 POLD3Q15054 466 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-205ENST00000562310 TEAD2Q15562 447 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 HIF1AQ16665 826 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 PARP6Q2NL67 630 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 RFWD3Q6PCD5 774 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 ZNF783Q6ZMS7 281 aa14.62□□□□□ -0.07
COMMD4-205ENST00000562310 SETD3Q86TU7 594 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-205ENST00000562310 TP53INP2Q8IXH6 220 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms