RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 RABEP2Q9H5N1 569 aa16.96■□□□□ 0.31
PKD1-225ENST00000562297 IL23AQ9NPF7 189 aa16.96■□□□□ 0.31
PKD1-225ENST00000562297 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
PKD1-225ENST00000562297 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.31
PKD1-225ENST00000562297 LAMA3Q16787 3333 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 SLC12A8A0AV02 714 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 ZNF840PA6NDX5 716 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 DFFAO00273 331 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 SUN1O94901 812 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 LINC00271P0C7V0 271 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 SARNPP82979 210 aaKnown RBP16.96■□□□□ 0.3
PKD1-225ENST00000562297 KCTD11Q693B1 232 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 UNC5AQ6ZN44 842 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 PRPF39Q86UA1 669 aaKnown RBP16.96■□□□□ 0.3
PKD1-225ENST00000562297 SRRM1Q8IYB3 904 aaKnown RBP16.96■□□□□ 0.3
PKD1-225ENST00000562297 MZB1Q8WU39 189 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 OVCA2Q8WZ82 227 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 AGAP3Q96P47 875 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 FNIP2Q9P278 1114 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 ZNF212Q9UDV6 495 aa16.96■□□□□ 0.3
PKD1-225ENST00000562297 PLXNA4Q9HCM2 1894 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 TMEM120BA0PK00 339 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 RASA4BC9J798 803 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 RASA4O43374 803 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 CACNG3O60359 315 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 NR1H3Q13133 447 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 KBTBD12Q3ZCT8 623 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 FBXL22Q6P050 247 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 KLHDC8BQ8IXV7 354 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 UMODL1-AS1Q8N2C9 162 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 ATPAF2Q8N5M1 289 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 AUTS2Q8WXX7 1259 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
PKD1-225ENST00000562297 YME1L1Q96TA2 773 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 MLPHQ9BV36 600 aaPredicted RBP16.95■□□□□ 0.3
PKD1-225ENST00000562297 YIPF1Q9Y548 306 aa16.95■□□□□ 0.3
PKD1-225ENST00000562297 BPTFQ12830 3046 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 DENND4CQ5VZ89 1909 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 LILRB3O75022 631 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 CNTN5O94779 1100 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 AP2A1O95782 977 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 CPP00450 1065 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 JCHAINP01591 159 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 URODP06132 367 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 HMBSP08397 361 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 BRAFP15056 766 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 RHOQP17081 205 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 NFKB1P19838 968 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 PRKCHP24723 683 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 SEC24CP53992 1094 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 ALFQ53S48 1182 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 UBE2Q1Q7Z7E8 422 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 PDZD8Q8NEN9 1154 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 SLC44A1Q8WWI5 657 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 ARNTL2Q8WYA1 636 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 IL12RB2Q99665 862 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 ZYG11BQ9C0D3 744 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 TMEM248Q9NWD8 314 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
PKD1-225ENST00000562297 CARNS1A5YM72 827 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 DRGXA6NNA5 263 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 GSTA2P09210 222 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 CCNB1P14635 433 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 KCNQ1P51787 676 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 KPNA1P52294 538 aaPredicted RBP16.94■□□□□ 0.3
PKD1-225ENST00000562297 OLIG2Q13516 323 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 SPARCL1Q14515 664 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 RAP1GAP2Q684P5 730 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 STEAP4Q687X5 459 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 NADSYN1Q6IA69 706 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 KLHDC10Q6PID8 442 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 BCAS4Q8TDM0 211 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
PKD1-225ENST00000562297 CDK5RAP1Q96SZ6 601 aaKnown RBP16.94■□□□□ 0.3
PKD1-225ENST00000562297 PIH1D1Q9NWS0 290 aaKnown RBP16.94■□□□□ 0.3
PKD1-225ENST00000562297 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 MAD1L1Q9Y6D9 718 aa16.94■□□□□ 0.3
PKD1-225ENST00000562297 ERI2A8K979 691 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 TRDMT1O14717 391 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 MATN3O15232 486 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 GJB5O95377 273 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 CSH1P0DML2 217 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 CSH2P0DML3 217 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 STX2P32856 288 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 ATP5C1P36542 298 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 PAPOLAP51003 745 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 CRADDP78560 199 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 HTRA4P83105 476 aaPredicted RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 MYEOVQ96EZ4 313 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 ZNF512Q96ME7 567 aaPredicted RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 TMEM106CQ9BVX2 250 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 KIF9Q9HAQ2 790 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 PPANQ9NQ55 473 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 SMYD2Q9NRG4 433 aa16.93■□□□□ 0.3
PKD1-225ENST00000562297 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
PKD1-225ENST00000562297 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms