RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 DEFB115Q30KQ5 88 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 RASSF3Q86WH2 238 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 NDUFAF2Q8N183 169 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 CERS2Q96G23 380 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 C8orf48Q96LL4 319 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 MYLK2Q9H1R3 596 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 CATSPERBQ9H7T0 1116 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 BFARQ9NZS9 450 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SCML2Q9UQR0 700 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 CHKBQ9Y259 395 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 NYNRINQ9P2P1 1898 aaKnown RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 TADA2AO75478 443 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 SELPP16109 830 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 VARS2Q5ST30 1063 aaKnown RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 ARTNQ5T4W7 220 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 CYB5D1Q6P9G0 228 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 NUP93Q8N1F7 819 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 DNAAF3Q8N9W5 541 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ACMSDQ8TDX5 336 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ERP27Q96DN0 273 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 FCRL2Q96LA5 508 aaPredicted RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 SERPINB11Q96P15 392 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 KLC4Q9NSK0 619 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 OSER1Q9NX31 292 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 KCNU1A8MYU2 1149 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 DFFAO00273 331 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 C2CD2LO14523 706 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 PSMD3O43242 534 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 TGDSO95455 350 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 CCNCP24863 283 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 SKIV2L2P42285 1042 aaKnown RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 GPR15P49685 360 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 OVGP1Q12889 678 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 FRG1Q14331 258 aaKnown RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 PRPSAP1Q14558 356 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 DDR2Q16832 855 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 SDHAF4Q5VUM1 108 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 MSANTD2Q6P1R3 559 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 CES3Q6UWW8 571 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ARHGAP36Q6ZRI8 547 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 TMEM135Q86UB9 458 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 MON1AQ86VX9 555 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 KLHDC8BQ8IXV7 354 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ATPAF2Q8N5M1 289 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 LZTR1Q8N653 840 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ZNF669Q96BR6 464 aaPredicted RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 LRRC37BQ96QE4 947 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 TRIM55Q9BYV6 548 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 FBXO44Q9H4M3 255 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ELAC1Q9H777 363 aaKnown RBP10.03□□□□□ -0.8
SMG1-205ENST00000561947 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 ZFATQ9P243 1243 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 NUDT5Q9UKK9 219 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 PCDHB5Q9Y5E4 795 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 PSAT1Q9Y617 370 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 HTTP42858 3142 aa10.03□□□□□ -0.8
SMG1-205ENST00000561947 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.8
SMG1-205ENST00000561947 CACNG3O60359 315 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 USP1O94782 785 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 GNRH1P01148 92 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 ITGA2BP08514 1039 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 ERVK-10P10266 1014 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 CCNB1P14635 433 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 MAGEA11P43364 429 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 NPY2RP49146 381 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 NRG1Q02297 640 aaPredicted RBP10.02□□□□□ -0.8
SMG1-205ENST00000561947 NLRP9Q7RTR0 991 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 CNTD1Q8N815 330 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.8
SMG1-205ENST00000561947 STKLD1Q8NE28 680 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 RFWD2Q8NHY2 731 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 USP33Q8TEY7 942 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 SIRPGQ9P1W8 387 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 PHF24Q9UPV7 400 aa10.02□□□□□ -0.8
SMG1-205ENST00000561947 FAM237BA0A1B0GVD1 139 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 TPP1O14773 563 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 ALDOAP04075 364 aaKnown RBP10.02□□□□□ -0.81
SMG1-205ENST00000561947 NQO1P15559 274 aaKnown RBP10.02□□□□□ -0.81
SMG1-205ENST00000561947 GRK4P32298 578 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 GP5P40197 560 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 ELF3P78545 371 aaPredicted RBP10.02□□□□□ -0.81
SMG1-205ENST00000561947 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
SMG1-205ENST00000561947 CTXN3Q4LDR2 81 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 NAPEPLDQ6IQ20 393 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 TBC1D1Q86TI0 1168 aaPredicted RBP10.02□□□□□ -0.81
SMG1-205ENST00000561947 ABI1Q8IZP0 508 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 ARHGAP18Q8N392 663 aa10.02□□□□□ -0.81
SMG1-205ENST00000561947 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms