RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SYPL2Q5VXT5 272 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 NAPEPLDQ6IQ20 393 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 FBXL19Q6PCT2 694 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 LGI2Q8N0V4 545 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 FMR1NBQ8N0W7 255 aaPredicted RBP12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 STK40Q8N2I9 435 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 EID2Q8N6I1 236 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 MFSD2AQ8NA29 543 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 OR14C36Q8NHC7 312 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 STK32AQ8WU08 396 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 KAT5Q92993 513 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 CRELD1Q96HD1 420 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 DHTKD1Q96HY7 919 aaPredicted RBP12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 SERAC1Q96JX3 654 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 BTN2A3PQ96KV6 586 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 UBL7Q96S82 380 aaPredicted RBP12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 TJP2Q9UDY2 1190 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3DA0A087WVF3 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3IA0A087WXS9 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3KA0A087X1G2 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3FA6NER0 549 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3LB9A6J9 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 CAPN9O14815 690 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 PSMA7O14818 248 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 SLC7A4O43246 635 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 MAGEC1O60732 1142 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 MOCS2O96007 188 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 IL1BP01584 269 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 IGLV3-25P01717 112 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3HP0C7X1 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TACR2P21452 398 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 MZF1P28698 734 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 DRD3P35462 400 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 OVGP1Q12889 678 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TARDBPQ13148 414 aaKnown RBP eCLIP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 MEA1Q16626 185 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 ZC3H12AQ5D1E8 599 aaKnown RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 HES3Q5TGS1 186 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 RAP1GAP2Q684P5 730 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3GQ6DHY5 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3CQ6IPX1 549 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 RRAGAQ7L523 313 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 KANSL1Q7Z3B3 1105 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 PRPF39Q86UA1 669 aaKnown RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 IQCHQ86VS3 1027 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 TBC1D3Q8IZP1 549 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 SPAG5Q96R06 1193 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 SLC4A5Q9BY07 1137 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 ST7Q9NRC1 585 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 ARHGAP20Q9P2F6 1191 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 DMTF1Q9Y222 760 aa12.21□□□□□ -0.45
CARMIL3-204ENST00000561354 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.46
CARMIL3-204ENST00000561354 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.46
CARMIL3-204ENST00000561354 LAMA5O15230 3695 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 KCNU1A8MYU2 1149 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 F5H5T6 163 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 TK2O00142 265 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 TRUB2O95900 331 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 CALCAP01258 141 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 CKMT2P17540 419 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 PPP1R2P41236 205 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 STK19P49842 368 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 OXCT1P55809 520 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 PPP2CBP62714 309 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 YWHAZP63104 245 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 PPP2CAP67775 309 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 BNIP3Q12983 259 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 STIM1Q13586 685 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 TMEM110Q86TL2 294 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 CHSY1Q86X52 802 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 SPATS2Q86XZ4 545 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 CCAR2Q8N163 923 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 ATP6V0D2Q8N8Y2 350 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
CARMIL3-204ENST00000561354 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms