RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 EDDM13A0A1B0GTR0 161 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 A0A1B0GTW7 788 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 SEMA4FO95754 770 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 SYPP08247 313 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 CHRNB2P17787 502 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 PMLP29590 882 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 CXCR3P49682 368 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 FMO1Q01740 532 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 CDR2Q01850 454 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 DEUP1Q05D60 604 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 GRIK2Q13002 908 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 KDM1BQ8NB78 822 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 ANKRD20A12PQ8NF67 263 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 PCMTD1Q96MG8 357 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 CNTNAP3BQ96NU0 1288 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 CNTNAP3Q9BZ76 1288 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 HSD3B7Q9H2F3 369 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 METTL5Q9NRN9 209 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 TMPRSS4Q9NRS4 437 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 ARHGEF38Q9NXL2 777 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 TMEM63CQ9P1W3 806 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 SERGEFQ9UGK8 458 aa17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 LIMA1Q9UHB6 759 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-208ENST00000561271 MID1O15344 667 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 OPHN1O60890 802 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 VAV1P15498 845 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZNF18P17022 549 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 CSRP1P21291 193 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 PSMD8P48556 350 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 TYRO3Q06418 890 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 MTA1Q13330 715 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 SLC12A1Q13621 1099 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 ARID5BQ14865 1188 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 NCAPHQ15003 741 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 CST6Q15828 149 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 BRMS1LQ5PSV4 323 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 SND1Q7KZF4 910 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZNF677Q86XU0 584 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 MMAAQ8IVH4 418 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 HDDC3Q8N4P3 179 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 EMC1Q8N766 993 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 GANCQ8TET4 914 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 NT5C3BQ969T7 300 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 C11orf70Q9BRQ4 267 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 BTBD1Q9H0C5 482 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 PCED1AQ9H1Q7 454 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 WDCPQ9H6R7 721 aa17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-208ENST00000561271 FRYQ5TBA9 3013 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 AKAP13Q12802 2813 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 IGF2RP11717 2491 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 KMT2BQ9UMN6 2715 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 BCAT2O15382 392 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 CNTN5O94779 1100 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 CYP1A1P04798 512 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 UBXN1Q04323 297 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 SEMA3BQ13214 749 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 SLC25A52Q3SY17 297 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 ALFQ53S48 1182 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 APTXQ7Z2E3 356 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 PHLDB2Q86SQ0 1253 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 STK40Q8N2I9 435 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 NEK11Q8NG66 645 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 ALG14Q96F25 216 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 PGAP3Q96FM1 320 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 FBXL12Q9NXK8 326 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 LRRK1Q38SD2 2015 aa17.7■□□□□ 0.42
CDC42BPB-208ENST00000561271 PLXNB3Q9ULL4 1909 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 A0A1W2PP55 124 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 TARSL2A2RTX5 802 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 RNASEH1O60930 286 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 CLDN11O75508 207 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 FSBPO95073 299 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 ATP1A3P13637 1013 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 CEACAM1P13688 526 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 STAT1P42224 750 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 PLK1P53350 603 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 SULT2A1Q06520 285 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 ZNF177Q13360 481 aaPredicted RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 C5orf22Q49AR2 442 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 USP30Q70CQ3 517 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 ZNF683Q8IZ20 524 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 C1orf216Q8TAB5 229 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 SLC30A5Q8TAD4 765 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 PTPRN2Q92932 1015 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 BIRC7Q96CA5 298 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 FEM1AQ9BSK4 669 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 SGK2Q9HBY8 427 aa17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 DNAAF2Q9NVR5 837 aaKnown RBP17.69■□□□□ 0.42
CDC42BPB-208ENST00000561271 SLC25A13Q9UJS0 675 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms