RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 PTPN20Q4JDL3 420 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 BEND6Q5SZJ8 279 aaPredicted RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 ARTNQ5T4W7 220 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 LYSMD4Q5XG99 296 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 DENND1BQ6P3S1 775 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 GJB7Q6PEY0 223 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 OLFML1Q6UWY5 402 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 GBP6Q6ZN66 633 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 SLC26A9Q7LBE3 791 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 BNIPLQ7Z465 357 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 RABEPKQ7Z6M1 372 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 CTAGE6Q86UF2 777 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 UNC45BQ8IWX7 931 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 CTAGE4Q8IX94 777 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 FAM71AQ8IYT1 594 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 AHI1Q8N157 1196 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 WDTC1Q8N5D0 677 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 EIF1ADQ8N9N8 165 aaKnown RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 HJURPQ8NCD3 748 aaPredicted RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 RNF139Q8WU17 664 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 UCMAQ8WVF2 138 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 DNASE2BQ8WZ79 361 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 SYN2Q92777 582 aaPredicted RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 BHMTQ93088 406 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 FAM131CQ96AQ9 280 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 MYEOVQ96EZ4 313 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 ZNF419Q96HQ0 510 aaPredicted RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 WDR24Q96S15 920 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 CPXM1Q96SM3 734 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 EIF3CQ99613 913 aaKnown RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 PRMT1Q99873 361 aaKnown RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 PARD6BQ9BYG5 372 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 TTYH3Q9C0H2 523 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 ACP6Q9NPH0 428 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 TMEM74BQ9NUR3 256 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 WSB2Q9NYS7 404 aaPredicted RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 TJP2Q9UDY2 1190 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 GGA2Q9UJY4 613 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 INTS6Q9UL03 887 aaKnown RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 LUC7L2Q9Y383 392 aaKnown RBP7.13□□□□□ -1.27
SPG11-224ENST00000561268 RAD54BQ9Y620 910 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 SHROOM3Q8TF72 1996 aa7.13□□□□□ -1.27
SPG11-224ENST00000561268 ZFC3H1O60293 1989 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 KCNU1A8MYU2 1149 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 WASH3PC4AMC7 463 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 TIMM44O43615 452 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 DAB1O75553 588 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 NDUFA10O95299 355 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 HMBSP08397 361 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 SERPINF2P08697 491 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 DLDP09622 509 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 ITPKAP23677 461 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 TNFRSF8P28908 595 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 CASP14P31944 242 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 WASP42768 502 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 GABRB2P47870 512 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 DHPSP49366 369 aaPredicted RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 TBX4P57082 545 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 PITX1P78337 314 aaPredicted RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 IRX4P78413 519 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 APBA1Q02410 837 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 RPL6Q02878 288 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 ZNF33AQ06730 810 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 LMAN2Q12907 356 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 STARD3Q14849 445 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 LAPTM4AQ15012 233 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 C5orf22Q49AR2 442 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 GLE1Q53GS7 698 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 MS4A13Q5J8X5 152 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 SYPL2Q5VXT5 272 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 CCDC70Q6NSX1 233 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 RAD9BQ6WBX8 426 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 PIP4P1Q86T03 277 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 RNF10Q8N5U6 811 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 CADM4Q8NFZ8 388 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 TRIM58Q8NG06 486 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 OR2T3Q8NH03 318 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 FIBINQ8TAL6 211 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 FAM71BQ8TC56 605 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 NT5C3BQ969T7 300 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 TTC17Q96AE7 1141 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 PGAP3Q96FM1 320 aaPredicted RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 BTN2A3PQ96KV6 586 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 MRGPRX3Q96LB0 322 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 CRACR2AQ9BSW2 395 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 NDST4Q9H3R1 872 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 POPDC2Q9HBU9 364 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 UBE2TQ9NPD8 197 aaPredicted RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 TMEM9BQ9NQ34 198 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 ITM2CQ9NQX7 267 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 ABCB8Q9NUT2 735 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 DNAAF2Q9NVR5 837 aaKnown RBP7.12□□□□□ -1.27
SPG11-224ENST00000561268 BCCIPQ9P287 314 aaKnown RBP eCLIP7.12□□□□□ -1.27
SPG11-224ENST00000561268 NAALADL1Q9UQQ1 740 aa7.12□□□□□ -1.27
SPG11-224ENST00000561268 INVSQ9Y283 1065 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms