RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PAXBP1Q9Y5B6 917 aa16.46■□□□□ 0.23
LMX1B-204ENST00000561065 SNX10Q9Y5X0 201 aa16.46■□□□□ 0.23
LMX1B-204ENST00000561065 ZFHX4Q86UP3 3567 aa16.46■□□□□ 0.23
LMX1B-204ENST00000561065 AKAP13Q12802 2813 aa16.46■□□□□ 0.23
LMX1B-204ENST00000561065 A0A1B0GTW7 788 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 M0QYT0 321 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 PAGE1O75459 146 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SRPRAP08240 638 aaKnown RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 CEACAM1P13688 526 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 CD59P13987 128 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 VAV1P15498 845 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ABCB4P21439 1286 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 FLT3P36888 993 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 MATKP42679 507 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ATXN3P54252 364 aaPredicted RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 NOMO3P69849 1222 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ZBTB16Q05516 673 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 AUHQ13825 339 aaKnown RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ERICH1Q86X53 443 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ZNF683Q8IZ20 524 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 KDM1BQ8NB78 822 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ALG14Q96F25 216 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ERGIC2Q96RQ1 377 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 TBCBQ99426 244 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ORAI3Q9BRQ5 295 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 PABPC3Q9H361 631 aaKnown RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 TMPRSS4Q9NRS4 437 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SUN2Q9UH99 717 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 CACNA1BQ00975 2339 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 UPK3BL1B0FP48 263 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 UPK3BL2E5RIL1 263 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 GOLGA6L19H0YKK7 550 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 MID1O15344 667 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 OPHN1O60890 802 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ADCY5O95622 1261 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SEMA4FO95754 770 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 DNTTP04053 509 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 GNSP15586 552 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ZNF18P17022 549 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SOX5P35711 763 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SULT1E1P49888 294 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 JAM2P57087 298 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 RNASE9P60153 205 aaKnown RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ST8SIA6P61647 398 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 FAM193AP78312 1265 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ECT2LQ008S8 904 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 CST6Q15828 149 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 FAM102AQ5T9C2 384 aaPredicted RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 TRIM72Q6ZMU5 477 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 SNX19Q92543 992 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 PTPRN2Q92932 1015 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 RNF34Q969K3 372 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 C18orf8Q96DM3 657 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 RPRD1AQ96P16 312 aaPredicted RBP16.45■□□□□ 0.22
LMX1B-204ENST00000561065 PCED1AQ9H1Q7 454 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 HSD3B7Q9H2F3 369 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 IL21RQ9HBE5 538 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 ARHGEF38Q9NXL2 777 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 OR51B4Q9Y5P0 310 aa16.45■□□□□ 0.22
LMX1B-204ENST00000561065 KNL1Q8NG31 2342 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SPAARA0A1B0GVQ0 90 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 C10orf142B7Z368 130 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 BCAT2O15382 392 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 CNTN5O94779 1100 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 GFPT2O94808 682 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 MOCS3O95396 460 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 F9P00740 461 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SERPINC1P01008 464 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SYPP08247 313 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 CHRNB2P17787 502 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SPINK2P20155 84 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SCNN1AP37088 669 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 CXCR3P49682 368 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 PLK1P53350 603 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 METAP1P53582 386 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 FMO1Q01740 532 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 FOXC1Q12948 553 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 TTC31Q49AM3 519 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 C5orf22Q49AR2 442 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 ALFQ53S48 1182 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 NAA35Q5VZE5 725 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 SND1Q7KZF4 910 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 MMAAQ8IVH4 418 aaKnown RBP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 HDDC3Q8N4P3 179 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 FRS2Q8WU20 508 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 CPA5Q8WXQ8 436 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 BIRC7Q96CA5 298 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 PGAP3Q96FM1 320 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 CAMK1GQ96NX5 476 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 FAM129BQ96TA1 746 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 BTBD1Q9H0C5 482 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms