RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SGF29Q96ES7 293 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 SERAC1Q96JX3 654 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 PRPF18Q99633 342 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 C10orf88Q9H8K7 445 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 RRN3Q9NYV6 651 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 PLLPQ9Y342 182 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 SNX9Q9Y5X1 595 aa14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 PDCD11Q14690 1871 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-220ENST00000560998 NRCAMQ92823 1304 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 SMIM35A0A1B0GVV1 85 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 APOC4-APOC2K7ER74 178 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ZNF701M0R085 212 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ENDOD1O94919 500 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 APOC2P02655 101 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ALDH3B2P48448 385 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 GDF10P55107 478 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PKDCCQ504Y2 493 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PPP1R26Q5T8A7 1209 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ACOT1Q86TX2 421 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 WDR75Q8IWA0 830 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 GIPC3Q8TF64 312 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PPP1R13LQ8WUF5 828 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 C18orf25Q96B23 403 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PIWIL1Q96J94 861 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 OSMRQ99650 979 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 RSAD1Q9HA92 442 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 IGSF9Q9P2J2 1179 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ZNF180Q9UJW8 692 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 TDRKHQ9Y2W6 561 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 H3BSA7 217 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 DPYSL4O14531 572 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 CYP2C9P11712 490 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 RGS7P49802 495 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 EPHB1P54762 984 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 UBAP2LQ14157 1087 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 TTC39BQ5VTQ0 682 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 PMF1Q6P1K2 205 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 ALKAL1Q6UXT8 129 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 TTC30AQ86WT1 665 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 TICAM1Q8IUC6 712 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 LRRC52Q8N7C0 313 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 NAT8LQ8N9F0 302 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 LRGUKQ96M69 825 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 CALN1Q9BXU9 219 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 SLC4A5Q9BY07 1137 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 CNOT11Q9UKZ1 510 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 HES2Q9Y543 173 aa14.29□□□□□ -0.12
RABGGTA-220ENST00000560998 H0YJX3 145 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 CAPNS1P04632 268 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 L1CAMP32004 1257 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 RPL22P35268 128 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 TUBA4AP68366 448 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 MMRN1Q13201 1228 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 PCBP1Q15365 356 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 16.1
RABGGTA-220ENST00000560998 ZNF423Q2M1K9 1284 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 MORN1Q5T089 497 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 LPCAT2Q7L5N7 544 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 UNC45BQ8IWX7 931 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 PDIK1LQ8N165 341 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 C2orf69Q8N8R5 385 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 SCAIQ8N9R8 606 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 RSAD2Q8WXG1 361 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 BORCS5Q969J3 196 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 CNBD2Q96M20 576 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 SLC2A11Q9BYW1 496 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 NUF2Q9BZD4 464 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 DOCK3Q8IZD9 2030 aa14.28□□□□□ -0.12
RABGGTA-220ENST00000560998 FBP2O00757 339 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CLASP2O75122 1294 aaKnown RBP14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 GRAP2O75791 330 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 RECQL4O94761 1208 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CDH6P55285 790 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 NAA20P61599 178 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 FAAP100Q0VG06 881 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CBLBQ13191 982 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 MFSD10Q14728 455 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CHI3L2Q15782 390 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 CCDC14Q49A88 953 aa14.27□□□□□ -0.12
RABGGTA-220ENST00000560998 GLRA4Q5JXX5 417 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms