RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 RNGTTO60942 597 aaKnown RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 LUC7L3O95232 432 aaKnown RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 IL1BP01584 269 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 LTFP02788 710 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 LCP1P13796 627 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 CTSOP43234 321 aaPredicted RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 VASPP50552 380 aaPredicted RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 PPP2CBP62714 309 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 PPP2CAP67775 309 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 CUL2Q13617 745 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 EDRF1Q3B7T1 1238 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 CDCP2Q5VXM1 449 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 RNF219Q5W0B1 726 aaPredicted RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 LCLAT1Q6UWP7 414 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.17■□□□□ 0.66
TPM1-226ENST00000560959 KDM7AQ6ZMT4 941 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 SLC25A45Q8N413 288 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 SPAG5Q96R06 1193 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 DPH1Q9BZG8 443 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 TLR6Q9Y2C9 796 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 PRAMEF26H0Y7S4 382 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 TRIM38O00635 465 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 PLRG1O43660 514 aaKnown RBP19.16■□□□□ 0.66
TPM1-226ENST00000560959 GABBR2O75899 941 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 FBXO21O94952 628 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 CD19P15391 556 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 LSSP48449 732 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 SULT2A1Q06520 285 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 ZCWPW2Q504Y3 356 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 HS1BP3Q53T59 392 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 OR4C6Q8NH72 309 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 MYEOVQ96EZ4 313 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 EEF2KMTQ96G04 330 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 SLC39A13Q96H72 371 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 FCRL2Q96LA5 508 aaPredicted RBP19.16■□□□□ 0.66
TPM1-226ENST00000560959 HSFY1Q96LI6 401 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 SERPINB11Q96P15 392 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 FOXD4L1Q9NU39 408 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 SSUH2Q9Y2M2 353 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 COL6A6A6NMZ7 2263 aa19.16■□□□□ 0.66
TPM1-226ENST00000560959 TP53BP1Q12888 1972 aaPredicted RBP19.15■□□□□ 0.66
TPM1-226ENST00000560959 B8ZZF3 427 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 K7ELQ4 463 aaPredicted RBP19.15■□□□□ 0.66
TPM1-226ENST00000560959 GP1BAP07359 652 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 CKMT1AP12532 417 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 CMA1P23946 247 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 DCAF6Q58WW2 860 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 FAM46CQ5VWP2 391 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 PMF1Q6P1K2 205 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 MMS22LQ6ZRQ5 1243 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 DSG4Q86SJ6 1040 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 DEPDC7Q96QD5 511 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 NUCKS1Q9H1E3 243 aaKnown RBP19.15■□□□□ 0.66
TPM1-226ENST00000560959 CEP83Q9Y592 693 aa19.15■□□□□ 0.66
TPM1-226ENST00000560959 PAEPP09466 180 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 C6P13671 934 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 DGKAP23743 735 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 PLK1P53350 603 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 DAB2P98082 770 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 STILQ15468 1287 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 CNGA2Q16280 664 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 SETMARQ53H47 684 aaPredicted RBP19.14■□□□□ 0.65
TPM1-226ENST00000560959 IGF2-ASQ6U949 168 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 BEND5Q7L4P6 421 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 APCDD1Q8J025 514 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 UBR7Q8N806 425 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 KLHDC7BQ96G42 594 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 RPL10LQ96L21 214 aaKnown RBP19.14■□□□□ 0.65
TPM1-226ENST00000560959 POLR1BQ9H9Y6 1135 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 USP29Q9HBJ7 922 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 KLHL11Q9NVR0 708 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 HPSEQ9Y251 543 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 PCDHB1Q9Y5F3 818 aa19.14■□□□□ 0.65
TPM1-226ENST00000560959 LZTS3O60299 673 aaPredicted RBP19.13■□□□□ 0.65
TPM1-226ENST00000560959 OPA1O60313 960 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 ZSCAN22P10073 491 aaPredicted RBP19.13■□□□□ 0.65
TPM1-226ENST00000560959 EPB41P11171 864 aaKnown RBP19.13■□□□□ 0.65
TPM1-226ENST00000560959 TBXAS1P24557 533 aaPredicted RBP19.13■□□□□ 0.65
TPM1-226ENST00000560959 ARHGAP40Q5TG30 622 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 CFAP52Q8N1V2 620 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 FRS2Q8WU20 508 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 TTC9Q92623 222 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 GRAMD1AQ96CP6 724 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 CLMPQ9H6B4 373 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 PREBQ9HCU5 417 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 MAPK8IP1Q9UQF2 711 aa19.13■□□□□ 0.65
TPM1-226ENST00000560959 CETN3O15182 167 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 ALOX15BO15296 676 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 SDC3O75056 442 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 RTN2O75298 545 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 F13A1P00488 732 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 FYNP06241 537 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 PFKFB1P16118 471 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 MAT2AP31153 395 aaKnown RBP19.12■□□□□ 0.65
TPM1-226ENST00000560959 OXCT1P55809 520 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 GABREP78334 506 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 VAC14Q08AM6 782 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 DPYDQ12882 1025 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 CBWD6Q4V339 395 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 CBWD3Q5JTY5 395 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms