RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 CSPG5O95196 566 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FTCDO95954 541 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RARAP10276 462 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 MYL4P12829 197 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CEBPBP17676 345 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 IGFBP4P22692 258 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FCARP24071 287 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SULT1E1P49888 294 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 KCNQ1P51787 676 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ATXN1P54253 815 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TBX4P57082 545 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 GNG11P61952 73 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CYP4F8P98187 520 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 DEUP1Q05D60 604 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TUBB2AQ13885 445 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 PDK2Q15119 407 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TLR1Q15399 786 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RPS6KA1Q15418 735 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TEAD2Q15562 447 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF77Q15935 545 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 HADHQ16836 314 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 EML3Q32P44 896 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 LEXMQ3ZCV2 418 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ATP13A4Q4VNC1 1196 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ARHGAP15Q53QZ3 475 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FAM133BQ5BKY9 247 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ZC3H12AQ5D1E8 599 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 STXBP5Q5T5C0 1151 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ERMARDQ5T6L9 678 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 GPR158Q5T848 1215 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 DCAF12L1Q5VU92 463 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CES5AQ6NT32 575 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RSRC2Q7L4I2 434 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 PEX26Q7Z412 305 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FAM131BQ86XD5 332 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 DDX42Q86XP3 938 aaKnown RBP eCLIP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ARID3BQ8IVW6 561 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 UNC45BQ8IWX7 931 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RCOR2Q8IZ40 523 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RASGEF1CQ8N431 466 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CPXM2Q8N436 756 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ARL14EPQ8N8R7 260 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RIN3Q8TB24 985 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RAPGEF5Q92565 580 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FGF13Q92913 245 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SMARCD2Q92925 531 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 USP13Q92995 863 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 WBP2Q969T9 261 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 BTN2A3PQ96KV6 586 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 RIPOR3Q96MK2 946 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ASB16Q96NS5 453 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 LRRC3BQ96PB8 259 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 GCNAQ96QF7 691 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CYP2S1Q96SQ9 504 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SLC30A3Q99726 388 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SNRNP25Q9BV90 132 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TUBB2BQ9BVA1 445 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 DCLK3Q9C098 648 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 WDCPQ9H6R7 721 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 UBE2ZQ9H832 354 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 FAM204AQ9H8W3 233 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 KIF9Q9HAQ2 790 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 GKN1Q9NS71 199 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 TDP1Q9NUW8 608 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CLDND1Q9NY35 253 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 DDX56Q9NY93 547 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 PPARGC1AQ9UBK2 798 aaKnown RBP5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF212Q9UDV6 495 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 CD207Q9UJ71 328 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 SNX12Q9UMY4 172 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 NEU3Q9UQ49 428 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF510Q9Y2H8 683 aa5.66□□□□□ -1.5
ZEB1-220ENST00000560909 COL6A3P12111 3177 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 NCOR1O75376 2440 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 SLC12A8A0AV02 714 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 FAM72CH0Y354 149 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 LEFTY2O00292 366 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 MSI1O43347 362 aaKnown RBP5.65□□□□□ -1.5
ZEB1-220ENST00000560909 MBTPS2O43462 519 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 SPOPO43791 374 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 ACSL4O60488 711 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 PAGE1O75459 146 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 ZRANB2O95218 330 aaKnown RBP eCLIP5.65□□□□□ -1.5
ZEB1-220ENST00000560909 PRAMEF12O95522 483 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 ATP1A1P05023 1023 aaKnown RBP5.65□□□□□ -1.5
ZEB1-220ENST00000560909 PYGMP11217 842 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 LAMP2P13473 410 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 FOSL2P15408 326 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 GJA1P17302 382 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 DESP17661 470 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 TCP1P17987 556 aaKnown RBP5.65□□□□□ -1.5
ZEB1-220ENST00000560909 KDELR1P24390 212 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 CDKN2BP42772 138 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 MARCKSL1P49006 195 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 GDF10P55107 478 aa5.65□□□□□ -1.5
ZEB1-220ENST00000560909 NAP1L1P55209 391 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms