RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FAM160A2Q8N612 972 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 FRMD1Q8N878 549 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 ZNF366Q8N895 744 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 KDM1BQ8NB78 822 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 RLN3Q8WXF3 142 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 TRIM11Q96F44 468 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 ZC3H10Q96K80 434 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 CHP1Q99653 195 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 THAP2Q9H0W7 228 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 DUSP15Q9H1R2 295 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 MTG2Q9H4K7 406 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 ABHD10Q9NUJ1 306 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 SLCO3A1Q9UIG8 710 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 ERVW-1Q9UQF0 538 aa15.71■□□□□ 0.11
SNRPA1-213ENST00000560856 SSU72P8A0A1W2PR75 194 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 ANKRD62A6NC57 917 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 SRGAP2O75044 1071 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 LRIG2O94898 1065 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 CYP1A2P05177 515 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 EPHX1P07099 455 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 SRPRAP08240 638 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 BCKDHBP21953 392 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 TGM1P22735 817 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 VASPP50552 380 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 ZNF75DP51815 510 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 GALCP54803 685 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 OXCT1P55809 520 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 SEMA3BQ13214 749 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 STARD3Q14849 445 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 FNDC3BQ53EP0 1204 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 CCDC122Q5T0U0 273 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 LAIR1Q6GTX8 287 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 PRR23BQ6ZRT6 265 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 CYP4V2Q6ZWL3 525 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 CEP68Q76N32 757 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 SLFN11Q7Z7L1 901 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 METTL3Q86U44 580 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 NLRP14Q86W24 1093 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 PYROXD2Q8N2H3 581 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 DCLK2Q8N568 766 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 ARHGEF26Q96DR7 871 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 PSMB7Q99436 277 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 PRSS16Q9NQE7 514 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 MYO1AQ9UBC5 1043 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 FZD10Q9ULW2 581 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 SCINQ9Y6U3 715 aa15.7■□□□□ 0.1
SNRPA1-213ENST00000560856 MOCS3O95396 460 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 PSMA2P25787 234 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 L1CAMP32004 1257 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 NUMBP49757 651 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 STK19P49842 368 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 SLC18A3Q16572 532 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 HNRNPA1L2Q32P51 320 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 RNF219Q5W0B1 726 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 TFAP2DQ7Z6R9 452 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 SETD3Q86TU7 594 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 TMPRSS6Q8IU80 811 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 PGBD3Q8N328 593 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 TC2NQ8N9U0 490 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 RUBCNQ92622 972 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 RPL10LQ96L21 214 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 ZYG11BQ9C0D3 744 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 MRPL47Q9HD33 250 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 CD93Q9NPY3 652 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 NDFIP2Q9NV92 336 aa15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 BCCIPQ9P287 314 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRPA1-213ENST00000560856 PLXND1Q9Y4D7 1925 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 A0A0D9SEW6 157 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 ILVBLA1L0T0 632 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 TTC34A8MYJ7 566 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 SYNCRIPO60506 623 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 MIPP30301 263 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 AIF1P55008 147 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 SULT2A1Q06520 285 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 C9orf64Q5T6V5 341 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 OR2T3Q8NH03 318 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 FRS2Q8WU20 508 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 MRFAP1L1Q96HT8 127 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 PACSIN1Q9BY11 444 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 RETREG1Q9H6L5 497 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 PRDM16Q9HAZ2 1276 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 USP36Q9P275 1121 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 SUN2Q9UH99 717 aa15.68■□□□□ 0.1
SNRPA1-213ENST00000560856 CFAP54Q96N23 3096 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 IGHV1OR15-9A0A0B4J2B8 117 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 SNAP91O60641 907 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 LRCH4O75427 683 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 ZMPSTE24O75844 475 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 RETP07949 1114 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 RHOCP08134 193 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 TPM1P09493 284 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 RHOQP17081 205 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 OR1E1P30953 314 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 CA9Q16790 459 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms