RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 TBC1D17Q9HA65 648 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 ARHGEF4Q9NR80 690 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 ELOVL2Q9NXB9 296 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 PLK2Q9NYY3 685 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 AMFRQ9UKV5 643 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 INTS6Q9UL03 887 aaKnown RBP12.45□□□□□ -0.42
IRF9-211ENST00000560852 CA14Q9ULX7 337 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 GUCA1BQ9UMX6 200 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 SNX10Q9Y5X0 201 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 COL4A3Q01955 1670 aa12.45□□□□□ -0.42
IRF9-211ENST00000560852 PRRT4C9JH25 899 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 H0Y626 953 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
IRF9-211ENST00000560852 PAPSS2O95340 614 aaPredicted RBP12.44□□□□□ -0.42
IRF9-211ENST00000560852 PABPC1P11940 636 aaKnown RBP12.44□□□□□ -0.42
IRF9-211ENST00000560852 GOT1P17174 413 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 AOC1P19801 751 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 TARSP26639 723 aaKnown RBP12.44□□□□□ -0.42
IRF9-211ENST00000560852 CDKN2BP42772 138 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 CDH6P55285 790 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 TPI1P60174 286 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 LMAN2Q12907 356 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 LRRC32Q14392 662 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PAFAH1B3Q15102 231 aaKnown RBP12.44□□□□□ -0.42
IRF9-211ENST00000560852 GEN1Q17RS7 908 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PLEKHG6Q3KR16 790 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PARP15Q460N3 678 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 TMEM215Q68D42 235 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 SLC9A4Q6AI14 798 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PEX26Q7Z412 305 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 KCTD6Q8NC69 237 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PCDH19Q8TAB3 1148 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 GPATCH2LQ9NWQ4 482 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 GGA2Q9UJY4 613 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 HCN2Q9UL51 889 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 PYCARDQ9ULZ3 195 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
IRF9-211ENST00000560852 BDP1A6H8Y1 2624 aa12.44□□□□□ -0.42
IRF9-211ENST00000560852 FAM170BA6NMN3 283 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 TRIM24O15164 1050 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 CREB3O43889 395 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 SRPRAP08240 638 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 DLDP09622 509 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 OR1E1P30953 314 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 CD70P32970 193 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 GGCXP38435 758 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 RWDD2BP57060 319 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 GNA12Q03113 381 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 ZNF33AQ06730 810 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 CDH18Q13634 790 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 PON2Q15165 354 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 SMTNL2Q2TAL5 461 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 ANKRD20A8PQ5CZ79 823 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 NAIF1Q69YI7 327 aaPredicted RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 CWF19L1Q69YN2 538 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 PQLC3Q8N755 202 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 NAT16Q8N8M0 369 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 DCAF4L2Q8NA75 395 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 TTC8Q8TAM2 541 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 USP33Q8TEY7 942 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 HSPH1Q92598 858 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 KRT35Q92764 455 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 RBM41Q96IZ5 413 aaKnown RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 CHRDQ9H2X0 955 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 GOLPH3Q9H4A6 298 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 EPHX3Q9H6B9 360 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 LZTFL1Q9NQ48 299 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 ABCB8Q9NUT2 735 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 NDFIP2Q9NV92 336 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
IRF9-211ENST00000560852 HS3ST2Q9Y278 367 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 SIT1Q9Y3P8 196 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 JRKLQ9Y4A0 524 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 F5P12259 2224 aa12.43□□□□□ -0.42
IRF9-211ENST00000560852 TBC1D3BA6NDS4 549 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 TMEM110-MUSTN1A8MSY1 372 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 PRR33A8MZF0 331 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 ATG13O75143 517 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 EGFP01133 1207 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 ATP5BP06576 529 aaKnown RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 RHOCP08134 193 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 CD48P09326 243 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 ZFXP17010 805 aaPredicted RBP12.42□□□□□ -0.42
IRF9-211ENST00000560852 HOXA6P31267 233 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 SERPINB6P35237 376 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 SERINC3Q13530 473 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 PTPRNQ16849 979 aa12.42□□□□□ -0.42
IRF9-211ENST00000560852 INO80DQ53TQ3 878 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms