RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TTYH1Q9H313 450 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ADAMTS10Q9H324 1103 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FBXO6Q9NRD1 293 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TUBA8Q9NY65 449 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 SLC17A7Q9P2U7 560 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ZC3H7BQ9UGR2 993 aaKnown RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TEX264Q9Y6I9 313 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 C15orf38-AP3S2A0A0A6YYH1 394 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 FAM237BA0A1B0GVD1 139 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TISP43B9A030 160 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TRIM49D1C9J1S8 452 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 AP3B1O00203 1094 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 BUD23O43709 281 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CST8O60676 142 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 GPR32O75388 356 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CHRNA1P02708 482 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ERBB2P04626 1255 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 EIF2S1P05198 315 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 KRT3P12035 628 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 P4HA1P13674 534 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ALOX15P16050 662 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TPSB2P20231 275 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ACO1P21399 889 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 SSTR1P30872 391 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 RPL22P35268 128 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 FDFT1P37268 417 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF132P52740 706 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 RABGGTBP53611 331 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CRYBB1P53674 252 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 KDSRQ06136 332 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 BST1Q10588 318 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 HERC3Q15034 1050 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 STILQ15468 1287 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 MAPRE2Q15555 327 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TPSAB1Q15661 275 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 AMHR2Q16671 573 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TMEM132AQ24JP5 1023 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 GRAMD1BQ3KR37 738 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 USP41Q3LFD5 358 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 KBTBD12Q3ZCT8 623 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 FAM26DQ5JW98 314 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 RWDD4Q6NW29 188 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 DARS2Q6PI48 645 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ARPINQ7Z6K5 226 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF554Q86TJ5 538 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TRIM74Q86UV6 250 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TRIM73Q86UV7 250 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 NT5DC4Q86YG4 428 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 RFX6Q8HWS3 928 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 WDR49Q8IV35 697 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ERI1Q8IV48 349 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CTAGE3PQ8IX95 158 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 AFAP1L2Q8N4X5 818 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 DBF4BQ8NFT6 615 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ACTL9Q8TC94 416 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 SEPT8Q92599 483 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 MPP4Q96JB8 637 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 VPS50Q96JG6 964 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 PRICKLE1Q96MT3 831 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TMEM121Q9BTD3 319 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF576Q9H609 170 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 SLC28A3Q9HAS3 691 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 PIDD1Q9HB75 910 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 METTL5Q9NRN9 209 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 VPS45Q9NRW7 570 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 TXNDC16Q9P2K2 825 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 STK39Q9UEW8 545 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CDH22Q9UJ99 828 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 CPSF3Q9UKF6 684 aaKnown RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 ADAM28Q9UKQ2 775 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 WDR37Q9Y2I8 494 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 PCDHA11Q9Y5I1 949 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
CCDC33-209ENST00000560565 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 MICAL3Q7RTP6 2002 aa8.76□□□□□ -1.01
CCDC33-209ENST00000560565 A0A088AWK7 358 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 GOLGA8IPA6NC78 632 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 CCDC160A6NGH7 325 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 GOLGA8JA6NMD2 632 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 M0QZ92 97 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 TXNDC9O14530 226 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ESRRBO95718 433 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 APOEP02649 317 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 C4BPAP04003 597 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 VTNP04004 478 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 RBP3P10745 1247 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 DARSP14868 501 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 MYOGP15173 224 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 AMPD1P23109 780 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 KDELR1P24390 212 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ELK3P41970 407 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ALDH1A3P47895 512 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 NR2C2P49116 596 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ALDH18A1P54886 795 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ADARP55265 1226 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 WDR5P61964 334 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 MRPS6P82932 125 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms